| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1418 |
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| Symbol | |
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| ID | 4846342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1407596 |
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| End bp | 1409851 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640116108 |
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| Product | Hef nuclease |
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| Protein accession | YP_001047329 |
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| Protein GI | 126179364 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1111] ERCC4-like helicases
[COG1948] ERCC4-type nuclease |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACG TCTCCCACCC GCTGATCCGG CCGGAAAGCA TCGAGGAACG GCGGTATCAA
CTCTCCATCG CGCTCCGGGC GCTCGATGCG AACACGATGG TCGTCCTCCC GACGGGCCTC
GGGAAGACGG CCGTCGCGCT CATTGTCGCG GCGTCCCGCC TCCACTCCCA CCCGGGGAGG
GTGCTCGTGC TTGCGCCCAC GAAACCCCTG GTTGAGCAGC ACCTCCGTTT CTTCAAACAG
TTCCTGCTCA TCCGGGACGG CTCCGAGCCG GATGAGTCCG ATTTTGCCAT GTTCACCGGG
GACACCCCCC CGGCGGAGCG GGCGCGGGCC TGGGAAGCGT GCCGGGTCTG TTTCGCCACC
CCGCAGGTGA TCAAGAACGA CTGCCTGGCA GGGAGGTACA GCCTCGCCGA CGTCGTGCTG
CTGGTCGTTG ACGAGTGCCA CCGGGCGGTG GGGAACTACG CCTATGTCTT CCTTGCCGGG
CACTACTGCA CCGCGGCAAA AGACCCCCTG CTGCTCGCGA TGACCGCCTC GCCCGGCGGT
GACCAGGCGA AGGTGCAGGA GGTCTGCAAC AACCTGCGCA TCGAGGCGGT CGAGACGAGG
GTGGAAACCG ACGAGGACGT CCGGCCCTAC ATCCACGAGC GTGATATCCA GTACGTCGAC
GTCTACCTGC CCGAAGAACT GCAGGCGGCG CTCGTCGTCC TCCGGGGGCT CGTGGAGTCG
CGTCTTGGCC GGCTCGCGAA ACTCAACTTC CGCGTCCCGA AACCGGACAA ACTCTCGATG
AAGGCGCTCA ACGCCTTGAA CGCCCAGATC CAGCAGCGTA TACGGACACG CGATCCATCG
GCGTTCATCG CGGCGTCCCT GCATGCCGAG TGCATGAAAC TCCGGCACGC CATATCGCTT
GCCGAGACGC AAGGGAGCGA GGCGCTCAAG CACTATCTCG CCCGGCTCGG TGCGGAAGGA
GTCTCGAGCG CAGGGAGCAA AGCGAGCAAG CGCCTCGTCG CCGACCCTGC CTACAAAAGC
CTCGTCGAGG CCGCAGCCGG CTGGAAGGAG GAACTGCACC CCAAGGCCTC GATCGTCCGC
GAACTGGTGC GGGCGCAGCT CGCGGCGCAC CCCGAGAGCC GGATCATCGT CTTCGCCACC
TATCGCGACA CCGTCCAGAC GCTCGTGGAT ACGCTCACCG CTGCCGGCAT CGCCTGCGAG
CGGTTCGTCG GCCAGGCGTC GCGGGACGCG GAGCGGGGAC TCTCGCAGAA GGAGCAGATC
GCGAGCCTCG CCCGGTTCCG GGAGGGCGAG TTCAGGTGCC TGGTCGCGAC CTCCGTGGGC
GAGGAGGGGC TCGACGTCCC CTCGACGGAT ATGGTGATCT TTTATGAGGC CGTCCCCTCG
GAGATCCGGA GCATCCAGCG GAAGGGACGA ACCGGGAGAA GCGGCAGCGG CACGATCGTC
GTGCTGGTGA CGAAGGGCAC GTCCGATGAG ACATTCCGGT ACGTGAGCCA GAGCCGGGAG
CGGGCGATGG TGACGGGGAT CAAGGGTATG AGCTCGGCAC CCGCCCCCGC CCCGATCCCC
GCCCCGGCCG TCCCGTCCGC CACTAGGCAG GCGGACATCC TCTCGTTTGC TCCGGCGGGA
CCGGCGATCA CCGTCGACGA CCGTGAGACG TCGTCGAGGG TCGTCGGGCG CCTGTACGAA
CTCGGGGCAT CGATCGCGCT GGAGCGCCTC GAGGTCGGCG ACTACGCCGT CGGCGACCGC
ATCCTCGTGG AGAGGAAGAC CGTGCAGGAC TTCATGAACA CCCTCGTCGA GCGCGATCTC
TTCGGGCAGA TCAAGGCGAT GGCCGACGCG GTGCCGCGTC CCGTCCTGAT CATCGAAGGA
GAGGACGACC TTTATTCGGT TCGAAACATC CACCCGAACG CTATCCGGGG CACGCTTGCG
GCCATCACGG TCGATATGGG CGTCGCGCTG ATACGTACGC GGGATGCGGA CGACACCGCC
GATACGCTCT ACGTCCTCGC ACAGCGGGAG GGGAGCGAGC GGGGAGAGCG GAAGGTGCAC
CCGAAGAAGT CTTACCGCTC GGTTCGTGAG GAGCAGGAGT ACGCGCTCGC TGCGTTTCCG
AACGTCGGTT TAAAAAGCGC ACGTCTCCTC CTCGAACACT TCGGCTCGCT CAAGGCGATC
GTCGATGCCG AACCGGAGGA GCTGGCGGCG GTGCACGGGA TCGGGGAAAA GACCGCCCGT
GCGATATGGG ATCTTGCCCG CAGACCTTAC CGCTGA
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| Protein sequence | MNYVSHPLIR PESIEERRYQ LSIALRALDA NTMVVLPTGL GKTAVALIVA ASRLHSHPGR
VLVLAPTKPL VEQHLRFFKQ FLLIRDGSEP DESDFAMFTG DTPPAERARA WEACRVCFAT
PQVIKNDCLA GRYSLADVVL LVVDECHRAV GNYAYVFLAG HYCTAAKDPL LLAMTASPGG
DQAKVQEVCN NLRIEAVETR VETDEDVRPY IHERDIQYVD VYLPEELQAA LVVLRGLVES
RLGRLAKLNF RVPKPDKLSM KALNALNAQI QQRIRTRDPS AFIAASLHAE CMKLRHAISL
AETQGSEALK HYLARLGAEG VSSAGSKASK RLVADPAYKS LVEAAAGWKE ELHPKASIVR
ELVRAQLAAH PESRIIVFAT YRDTVQTLVD TLTAAGIACE RFVGQASRDA ERGLSQKEQI
ASLARFREGE FRCLVATSVG EEGLDVPSTD MVIFYEAVPS EIRSIQRKGR TGRSGSGTIV
VLVTKGTSDE TFRYVSQSRE RAMVTGIKGM SSAPAPAPIP APAVPSATRQ ADILSFAPAG
PAITVDDRET SSRVVGRLYE LGASIALERL EVGDYAVGDR ILVERKTVQD FMNTLVERDL
FGQIKAMADA VPRPVLIIEG EDDLYSVRNI HPNAIRGTLA AITVDMGVAL IRTRDADDTA
DTLYVLAQRE GSERGERKVH PKKSYRSVRE EQEYALAAFP NVGLKSARLL LEHFGSLKAI
VDAEPEELAA VHGIGEKTAR AIWDLARRPY R
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