| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1379 |
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| Symbol | |
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| ID | 4848233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1370731 |
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| End bp | 1372797 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116069 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001047290 |
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| Protein GI | 126179325 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCA AGTATGTACA AACTACATGC CCGTACTGCG GTACGGGGTG CAGCTTCAAC
CTCGTTGTGA AGGACGGGAA GGTTGTCGGC ACACAACCTT ACAAGCGTTC TCCGGTCAAC
GAGGGGAAAG TCTGCCCCAA GGGCACTTAC GCTCACGAGT TCGTGAACAG CCCGGACCGC
CTCACAAAGC CGCTCATCAA GAAGGACGGC AAGTTCGTCG AGGCGACCTG GGACGAGGCT
TACGACCTGA TCGCACAGAA GTTCAAGTCG TATAAGCCCG ATGAAATCGC CTGCCTCTCC
TCAGCCCGTG TCTCAAACGA AGAGAACTAC CTGCTGATGA AACTGGCACG CGGCGTCTTC
AAGACGCGCC ACATCGACCA CTGCGCCCGG CTCTGCCACG CATCCACCGT CGCCGGTCTC
GCCGCCTCGT TCGGCTCCGG TGCGATGACC AACTCCATCC TCGACATCGC CGAGTCGAAG
TGCGTCTTCG TCATCGGGTC CAACACATTC GAGCAGCACC CGCTCATCGG CCGCAAGATC
GTTCAGGCAA AGCTGAACGG TGCAAAAATC ATCGTGTTCG ACCCGCGCTA CACGCCGACC
GCGAAGCAGG CGGATCTCTA TGCATCCTTC TACTCCGGCA CCGATGTGGC CGTCCTCAAC
TGCCTGATGG GAGAGATCAT CAGGAACGGA TGGGAGGACA AGGAATGGGT CTCGAAGCGT
GCAAAGGGAT ACGAGGAACT CAAAGCGACG GTGACGAGCG ACACCTATCT CCCCGAGAAC
GTCGAGAAGA TCTCCGGCAT TGCTGCTGCG GACCTCAAGA CCGCAGCCGA ATGGATCGGT
ACCGCTGAAT CCTCCGCGCT CCTCTACTCG ATGGGCATCA CCCAGCACAC CGTCGGCGTC
GACAACGTCA AGTCGACCGC TAACCTCCAG ATGCTGACCG GAAACATCGG CAGGCGTGGT
GGCGGCGTGA ACGCACTCCG TGGCCAGAAC AACGTTCAGG GCGCCTGCGA CATGGGTGCG
CTCCCGGTCG TCTTCACCGG CTACCAGAAG GTCATCGACG AGGCCGTCCA CAAGAAGTTC
GCCGACGCCT GGGGCTTCCC CGACGGCATC TGCGAGCCGA AGAACGGCTA CGAAGTCACC
GTCATGTTCA ACGTCCTGAC CGACAACCCC GGCGAGCTCA AGGCGATGTA CATCATGGGC
GAGAACCCGA TGCTCTCCGA CCCGGACCTC ACCCACGCGG AGCACGCACT CGAGCAACTC
GAGTTCCTGG TCGTCCAGGA TATCTTCCTG ACCGAGACCG CCCAGCACGC AGACGTCGTG
CTGCCCGCCA CCTGCTACGC AGAGAAGGAA GGTACCCAGA CCTCCACCGA GCGGCGTGTC
CAGATGTGGC GCAAGGCCCA GGACCCGCCC GGCGAGGCGA AGGTCGACTG GCAGATCATC
AGCGAAGTGG CGGCCGCCAT GGGCTACGCC GACCAGTTCC CCTACCAGAG CGCCGAGGAG
ATCTTCAACG AGATCGCCGC CCTCACGCCG TCCTACCACG GGATGAACTA CGAGCGGCTC
AACCGGCCCG AAGCACTCCA CTGGCCCTGC CCCACGGAAG ACCACCCCGG CACACCCATC
CTGCACATCG GCAAGTGTTC GCACCCCGAT GGCATGGGCG TGATGCACCC CATCGAGTGG
AAACCGCCGG CGGAAGTCCC CGACGATGAG TACCCCTACA TCCTCACCAC CGGCCGCTGC
CTCTGGCACT GGCACACCGG GTCCATGACC CGCCGCTCCG CGACCCTCGA TACCGAGGTC
CCGACCGGCT GGATCGAGAT CAACACCGAG GACGCAAAAG AACTCGGTAT AGCGAACAAG
GAGATGGTCC GTGCGACCTC CCGCCGTGGC ACGGTGGACG TCCCCGCGAA AGTGACCGAC
GAGATCAAGA AGGGCGTCAT GTTCATGCCG TTCCACTTCG CCGAGTGTGC AGCGAACAGA
CTGACGAACA ACGCACTCGA CCCGATCGCG AAGATCCCTG AGTTCAAGGC CTGTGCTGTG
AAGGTCGAGA AGATTACGGA GGCCTGA
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| Protein sequence | MDLKYVQTTC PYCGTGCSFN LVVKDGKVVG TQPYKRSPVN EGKVCPKGTY AHEFVNSPDR
LTKPLIKKDG KFVEATWDEA YDLIAQKFKS YKPDEIACLS SARVSNEENY LLMKLARGVF
KTRHIDHCAR LCHASTVAGL AASFGSGAMT NSILDIAESK CVFVIGSNTF EQHPLIGRKI
VQAKLNGAKI IVFDPRYTPT AKQADLYASF YSGTDVAVLN CLMGEIIRNG WEDKEWVSKR
AKGYEELKAT VTSDTYLPEN VEKISGIAAA DLKTAAEWIG TAESSALLYS MGITQHTVGV
DNVKSTANLQ MLTGNIGRRG GGVNALRGQN NVQGACDMGA LPVVFTGYQK VIDEAVHKKF
ADAWGFPDGI CEPKNGYEVT VMFNVLTDNP GELKAMYIMG ENPMLSDPDL THAEHALEQL
EFLVVQDIFL TETAQHADVV LPATCYAEKE GTQTSTERRV QMWRKAQDPP GEAKVDWQII
SEVAAAMGYA DQFPYQSAEE IFNEIAALTP SYHGMNYERL NRPEALHWPC PTEDHPGTPI
LHIGKCSHPD GMGVMHPIEW KPPAEVPDDE YPYILTTGRC LWHWHTGSMT RRSATLDTEV
PTGWIEINTE DAKELGIANK EMVRATSRRG TVDVPAKVTD EIKKGVMFMP FHFAECAANR
LTNNALDPIA KIPEFKACAV KVEKITEA
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