| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1364 |
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| Symbol | |
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| ID | 4846580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1356455 |
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| End bp | 1357141 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116054 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001047275 |
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| Protein GI | 126179310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.797518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGG CAGTCTTCGT CTTCGATATC CTCCTCCCGG CACTGATGCA GGGGCTGGTT
GTAACCCTGC AGCTGATCGC GTGCTCCGCC CCGTTCGGCC TTGCGCTCGG GATCGCCGTT
GCGGTGGGGA GGCAGTACGG CAACCCCGTT ATATCCTGGA TCTGCAAGAC ATTCGTCTTC
CTCATCAAGG GCACGCCGCT CCTCCTTCTC CTCTTCATCC TCTACTTCGG CCTCCCGGCG
GTCGGGATCA CCTTCACCGC GTTCGTGGCA TCGGTGGTCG GGTTTATCCT TTGCAACGGG
GCGTATAACG CCGAGTACAT CCGGGGCGCC CTCATATCGA TCAAGGAAGG CCAGATGGTT
GCCGCCCAGG CGCTCGGGAT GACCCGGTGG CAGGCGATCA GAAACGTCAT CCTGCCGCAG
GCGCTCCGCC GGGCGATACC GGGGCTTTCG AACGAGTTCA TCTACCTGAT CAAGTACTCG
TCGCTTGCCT ACATGATCAC GGTGATCGAA CTCTCCGGGG CGGGGAAACT GGTGGCGACG
AAGTACTTCA CCTACACGGA GTCGTTTGCA GCCGTCGGCA TCGTCTACCT CGTGCTGGTG
ACGATCACGA CCTTCGCGGT CAATATCCTG GAGAAGCGGG TGGCCGTCCC CGGAACGACC
CGGGCCACCG CCGCGGCTCA ACTGTAA
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| Protein sequence | MDLAVFVFDI LLPALMQGLV VTLQLIACSA PFGLALGIAV AVGRQYGNPV ISWICKTFVF
LIKGTPLLLL LFILYFGLPA VGITFTAFVA SVVGFILCNG AYNAEYIRGA LISIKEGQMV
AAQALGMTRW QAIRNVILPQ ALRRAIPGLS NEFIYLIKYS SLAYMITVIE LSGAGKLVAT
KYFTYTESFA AVGIVYLVLV TITTFAVNIL EKRVAVPGTT RATAAAQL
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