| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1313 |
|---|
| Symbol | |
|---|
| ID | 4848080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1297072 |
|---|
| End bp | 1297575 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640116004 |
|---|
| Product | peptidylprolyl isomerase, FKBP-type |
|---|
| Protein accession | YP_001047225 |
|---|
| Protein GI | 126179260 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.104381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGGA GACATGCGTG CGGCATCCTG CTGCTGATCG CGTGCGTCCT GGCCCTCTGT
TCGGGCTGCA TCGCGGGCGA AGAGGTGCGG GTGAAGTCCG GAGACACGGT GCTGGTCCAC
TACACCGGCA CCCTCGAGAA CGGAACGGTC TTCGACAGTT CCGCCGGGCG CGAACCACTC
CGGTTTACCG TCGGGACCGG CAAAGTGATC CCGGGGTTCG ATGAGGGTGT CGTCGGGATG
CAGGTCGGGG AGGAAAAAAC TCTTCATATT CCGGCCGACC GGGCATACGG ACCATACCGC
GAGGATCTCG TCTTCAACAC GACCGAGACT GCCGGTACGG AGAACCTGAC GGTCGGCGAT
CAGGTCGGAT TACCCCTGCA GAACGGACAG GTGCTGCCCG CAAAGGTCGT CGCCGTATCG
GCCGATGCAG TCACCGTCGA TGCGAACCAC CATCTCGCGG GCGAGGATCT TACGTTCAAT
GTCAGTCTGG TTGAGATTGT GTAG
|
|---|
| Protein sequence | MRGRHACGIL LLIACVLALC SGCIAGEEVR VKSGDTVLVH YTGTLENGTV FDSSAGREPL
RFTVGTGKVI PGFDEGVVGM QVGEEKTLHI PADRAYGPYR EDLVFNTTET AGTENLTVGD
QVGLPLQNGQ VLPAKVVAVS ADAVTVDANH HLAGEDLTFN VSLVEIV
|
|---|
| |