| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1226 |
|---|
| Symbol | |
|---|
| ID | 4846821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1204927 |
|---|
| End bp | 1205712 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640115916 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_001047139 |
|---|
| Protein GI | 126179174 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCG CCTGCTCCGT CGCCGGTTCC GATTCGGGGG GAGGGGCGGG CGTCCAGGCG
GACCTGAAGA CTTTTGTAGC GCTCGGGATC TGGGGGCTGA CGGTCGTTAC GGCGGTGACC
GCCCAGAACA CCCGCGAGGT GCGGGGGACC TGGATGCTCC CCCCCGACGC GGTGCGGGCG
CAGATGGAAG CGGTCGCCGA CGACTTCTTC ATCGGGGCGT GGAAGACCGG GATGCTCGGG
AACGCCCCGA TCATCCGGGC GGTCGCGGAG GCCCTGCCGG AGGAGGCCGC GCTCGTGATC
GACCCGGTGA TGGTCTCGAC GTCGGGCCAC CGGCTGCTTG CGGAGGATGC GGTCAGGGAT
CTCGCGGAAC TGCTCATCCC CCGGGCGGCG GTCGTCACCC CGAACATCCC GGAGGCGGAG
GTGCTCAGCC GGATGAACGT CGCGACCGTC GAGGATATGG CTGACGCCGG CCGGCGGATC
CTCGATCTCG GTGCCCGTGC CGTGGTGGTG AAGGGCGGGC ACCTCCCCGG CGGCGCGGCG
GTCGACATCC TGGTCGACCG GGAGGGGGAG ATGCGCCTCT CCGGCGAGCG GTATCCCTAT
TCGGTGCACG GATCGGGGTG CTGCTTCTCG GCGGCGCTCA CGGCATGCCT TGCCCGGGGG
ATGCACGCGC GCGGTGCATT CGCCGCCTCC AGGGAGTTCA TCGACACGGC CATCCGGGAA
GCAGCGGGGG GTCCCGGGCC GGTCTGGGCG GTCAACCCCG GAGGAATAAT ATTTCACAGG
TTGTGA
|
|---|
| Protein sequence | MIAACSVAGS DSGGGAGVQA DLKTFVALGI WGLTVVTAVT AQNTREVRGT WMLPPDAVRA
QMEAVADDFF IGAWKTGMLG NAPIIRAVAE ALPEEAALVI DPVMVSTSGH RLLAEDAVRD
LAELLIPRAA VVTPNIPEAE VLSRMNVATV EDMADAGRRI LDLGARAVVV KGGHLPGGAA
VDILVDREGE MRLSGERYPY SVHGSGCCFS AALTACLARG MHARGAFAAS REFIDTAIRE
AAGGPGPVWA VNPGGIIFHR L
|
|---|
| |