Gene Memar_1037 details

Gene Information

• Locus tag: Memar_1037
• ID: 4847690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1019595
• End bp: 1020251
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640115725
• Product: endonuclease III
• Protein accession: YP_001046952
• Protein GI: 126178987
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0177] Predicted EndoIII-related endonuclease
• TIGRFAM ID: [TIGR01083] endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.36835
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGCA CGACCGCCTG CGAGGTCTAC CGCCGTCTTC TCGAGCACTA TCCCGTCGTC 
GACGGCAGGC GCCATTTTCT CGAGTTTCAT AACCCCTTCG AGACGCTGAT CCTCACCATC 
CTCTCGGCGC AGACGACCGA CCGTGCCGTG AACGCCGTCC GCGACGATCT CTTCTCCCGC 
TACCCGACGC CGGAGGCGCT CGCCCGCGCG GAGCCGGAGG AGGTGGAGCC GCTGATCAGG 
ACGATCGGGT TTCACCACGC CAAAGCCCGC TACATCGTCG GGGCGGCAAG AAAACTCGTC 
GCCGAGTTCG GCGGCGAGGT TCCGCGGACG ATGGAGGAAC TCCAGACGCT GCCCGGTGTC 
GGGAGGAAGA CCGCAAACAT CGTCCTCTCC CACGCGTTCG ATATCAACGT CGGGATCGCG 
GTCGACACCC ACGTCCGCCG GGTCTCGAAG AGGCTCGGGT TCACCGACAG CACGAACCCC 
GATATCATCG AGCGCGATCT CGTCGCTCTC TTCCCCGAGG AGGTCTGGCG GGACATCAAC 
TACCTCCTGA TCCGCCACGG GCGCGCCGTC TGCACGGCAA AGAACCCGAA GCACGAGGTC 
TGTGTCGTCG CGGGGCTTTG CCGGTATTAC CGGGAGTTCT CGGGCGGGGA GGAGTAG 

 

Protein sequence

MNRTTACEVY RRLLEHYPVV DGRRHFLEFH NPFETLILTI LSAQTTDRAV NAVRDDLFSR 
YPTPEALARA EPEEVEPLIR TIGFHHAKAR YIVGAARKLV AEFGGEVPRT MEELQTLPGV 
GRKTANIVLS HAFDINVGIA VDTHVRRVSK RLGFTDSTNP DIIERDLVAL FPEEVWRDIN 
YLLIRHGRAV CTAKNPKHEV CVVAGLCRYY REFSGGEE