| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1004 |
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| Symbol | |
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| ID | 4846273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 991662 |
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| End bp | 992603 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640115691 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001046919 |
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| Protein GI | 126178954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | [TIGR02371] alanine dehydrogenase, Archaeoglobus fulgidus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0342377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATT ACCCGGTTCA TGCCGGATAC CCGCCGTATG CCGAGGTGAA CCCGGCGATT
GAAGCGGCCT TTGCCGAACA CGGGAGAGGC AATGTTCAGA TGCCGCCGAA GGTCTACGTG
ACGTTCGTCG AGAGCGGGGA TTTCCGGACG ATGCCGGCAT ACCTCCCGGC CCAGGAGATT
GCCGGGGTGA AGATCGTCAA CGTCCACCCG CATAACCGCA CGAGAGGCCT TCCCACCGTC
ATGGCGCTCA CCGTCATCAT CGATATAACA ACCGGTATCC CGACGGCGAT CATCAACGCC
ACCGAACTCA CCGCGCTGCG AACCGGATCA GCGGGCGCCA TTGCGGCGAA GTATCTCGCG
CCCCGCCACC CCGTCACCCT CGGGATCGTG GGAGCCGGGC GGCAGGCGGA GGCGCAGGTC
GAGGCAACGG CTGCCTCGCT CGCGATCGAG GAGATCCTGG TCTGGAGCAG GACTGAGAAG
AGTGCGGAGG CTTTTGCAGC GCGTTACTCC GACTACAATG CCCGGAGCGT CCCGATCGAG
CGCGCCTGCG ACTGCGACGT GCTGACCACG ACGACGCCGT CGACGAAACC GGTCGTGATG
GCGGACTGGA TCCACGAAGG GACGCACATC AATGCGATCG GCGCGGACGC CCCCGGCAAA
CAGGAACTGG ATCCCACGAT CCTGGAGAAT GCCGAGGTCT TCGTCGACGA CCCCGGCCAG
GCGACCCACT CGGGCGAGGT CAACGTCCCG GTCGGCACCG GGTACTACGA CCCCGCCCGG
ATCGCGGGAA CCCTCGGCGA GGTCGTCATC GGGAAGAAGG GGCGGTCGTC CCCGGACGCC
ATTACAATCT TCGACTCCAC CGGGCTTGCC ATCCAGGACC TCGCCATCGC CGCCCTCGTC
CTGCGGGACG GGGACGGGGG ATACGAACTG CCGTTTCCGT GA
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| Protein sequence | MKYYPVHAGY PPYAEVNPAI EAAFAEHGRG NVQMPPKVYV TFVESGDFRT MPAYLPAQEI
AGVKIVNVHP HNRTRGLPTV MALTVIIDIT TGIPTAIINA TELTALRTGS AGAIAAKYLA
PRHPVTLGIV GAGRQAEAQV EATAASLAIE EILVWSRTEK SAEAFAARYS DYNARSVPIE
RACDCDVLTT TTPSTKPVVM ADWIHEGTHI NAIGADAPGK QELDPTILEN AEVFVDDPGQ
ATHSGEVNVP VGTGYYDPAR IAGTLGEVVI GKKGRSSPDA ITIFDSTGLA IQDLAIAALV
LRDGDGGYEL PFP
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