Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0953 |
Symbol | |
ID | 4846628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 934340 |
End bp | 935134 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640115639 |
Product | hypothetical protein |
Protein accession | YP_001046868 |
Protein GI | 126178903 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0958657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGGGGG TAGACCAGGC TCAAATCGAT AAAATTCTCT CCGGCGCGTC CTCCGAGGAC CCGGAGGCAC GTCTCGACAC TCTCGAGAAG GAACTGGACT TCGTCAAGAC CTCGATCAAG CGGCTGCTCA TCGATCTCCG GGAACGGATG AACGAACTGG ACAACCCGTT CACCAGCGCC GCCGTTTCGT ACGCAGGGAA CCGGTTCGAG CAGCCGGCTG GCACCCCGGA CGACGACGAG GCAGACGACG AGATGCCCGA GCTGGACGCT CTGCCCGCGG ATCTCGGCCT GAAGCCGGAG AAACCGGCGC TTGAGGGGCC TGGCGGCGAA CTCTTCCCGA CCGACCTCGA GGCGGCCGGG TTCCCGGGAG CCCGCGCTGG CGCTCTTCCG CAGGCGAAAC CCGCAGGAAA GCTCAAACTC CAGAAGGTTC ACCGGCTCTT TGAGTGGGTG CACCGGGGAT GCTCCAGGTA CGGGCACGAG CACATGGCAA TCATGATCGA CGCCTACCGG TCGATGGGTT ACATCACCGA AGAGGTCTCC GACCAGATTG GCGAGATCAT GAGGATGGCG CCCGAAACCC GGAAAGACGT GCAGGAGATC GGCCCGAACG AATTCGTCTC GGAACTCTAC GTCTTGAACC GGATCCTCGA CCCCGACGAC TCCACGCTCG ACCGCGACAT GATTGAGGTG CTGATGCTCT CCCGGCGGGA TGCAGGGGAA CTGGACAGCG AGAAGACATC CTCACAGGAA CGGAATGCCG GTGATGCCTG GATTGAGTTG CTGGACAGGA TATGA
|
Protein sequence | MVGVDQAQID KILSGASSED PEARLDTLEK ELDFVKTSIK RLLIDLRERM NELDNPFTSA AVSYAGNRFE QPAGTPDDDE ADDEMPELDA LPADLGLKPE KPALEGPGGE LFPTDLEAAG FPGARAGALP QAKPAGKLKL QKVHRLFEWV HRGCSRYGHE HMAIMIDAYR SMGYITEEVS DQIGEIMRMA PETRKDVQEI GPNEFVSELY VLNRILDPDD STLDRDMIEV LMLSRRDAGE LDSEKTSSQE RNAGDAWIEL LDRI
|
| |