Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0670 |
Symbol | |
ID | 4847786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 640815 |
End bp | 641588 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640115353 |
Product | hypothetical protein |
Protein accession | YP_001046585 |
Protein GI | 126178620 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.564115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGGGG TTTCGGGCAC CCCTGCCGGC CGTGGCCGGA ACCGGCCCGG ATACCCGGGG CAACCCCCGT CTCCACCGTG CCGCCGGCTG CCGGCCCGGA TCGCCCCCGG TTCCGGAGGC GGAAAAACAC GGCCGGACGA GCCGAACGGC GGGGCGGTGC GGGTCGCCGG TGGAATTGTA TATAATGGAA TACAATATTT AATGGAATAT ATGTCCAGCA AGAAGGAAGT CACCATCGGG ATCACCATCA ACCTCGAGAA CTACGAAAAT CTCCGTCTCG AGGTCGAGGG CGATGTAGAG ACCCATGAGG ATGTGGACGA CCTTATCACA TTCCTCGACG GGATCCTTGC CCGGGTCGGG CGCGGCGATC AGGCGACCGC CGAGCGTGTG GACGCATACC GCCGGCGCGT TCTCGCGGCC AGGCCCGCGG TTCCGGAGGC ACCCGCCCCG GAGAAGAAGA CGCCTGAGCC GGTGGCGGAG CCTGCTCCCC GCGAGGAGAA AAAGGCCTGC CCTCCGCCCG AGGTCATCGC AGCGGCAATC CCGCCGGCCC CGGAGCACCC CAGGACACCC GAACCGCCCG CAAAACCGGA GGAGAAGCCC ACCGTACAGC CGGAGGCGGC CCCGACGGAG GAACCGGCTC CCGCGAAGCC GTCGGAGGCC CCGGCGGAGG ACGTCTGCGA GGTCTGCGGA GCGGAAGTGA CGAAATCGCA GGCGAAACTC TCCCAGCTCT TCATGAGCAA GACACTCTGT AAGAAGTGCA TGGAACAGCC CTGA
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Protein sequence | MCGVSGTPAG RGRNRPGYPG QPPSPPCRRL PARIAPGSGG GKTRPDEPNG GAVRVAGGIV YNGIQYLMEY MSSKKEVTIG ITINLENYEN LRLEVEGDVE THEDVDDLIT FLDGILARVG RGDQATAERV DAYRRRVLAA RPAVPEAPAP EKKTPEPVAE PAPREEKKAC PPPEVIAAAI PPAPEHPRTP EPPAKPEEKP TVQPEAAPTE EPAPAKPSEA PAEDVCEVCG AEVTKSQAKL SQLFMSKTLC KKCMEQP
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