Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0535 |
Symbol | |
ID | 4846781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 517692 |
End bp | 518903 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640115214 |
Product | major facilitator transporter |
Protein accession | YP_001046450 |
Protein GI | 126178485 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0328031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCG AAAAACCGCA TCGGCTCCGC ACCCTCCGGA ACCGTATCGC CGCATCGCCG GACGCGATTC TCGTGCTGGT CGTGCTCGTC ATCTTCATGG ACATGATGAT CTACGGTCTC CTCATCCCGG TCTTCCCCCA GTATGCCCCC CGGCTCGGTG TGGGGGAATC GGTCATCGGG ATCATCTTCG GGATCTACGC CGGAATGCTC CTCCTCTTCT CCATCCCGAT GGGCCTCCTC TCCGACCGGG TGGGCCGCCG CCCTCTCATT GTCGCCGGAA TGCTCCTCCT CGCGCTCGCG ACGGCGCTCT TCGGCTTCTC GACCACGATC ACCCACCTGG TTGCCGCCCG GACGGTTCAG GGGGTGTCGG CCGCGGCCAC CTGGTCGGCG GGGCTTGCGC TCCTCGCCGA TACCTGCGAC CCCGCCCGGC TCGGGGAGAA GATGGGGGTC GCGCTCTCGG CGGTCGGGGT AGGGACGATC CTCGGGCCGG TGGCCGGGGG GCTGCTCTTT GAGTATGCGG GCTACACCGC CACCTTCCTC ATCCCGGCGG CGCTGGCGGC CTCCGTCGGC CTCGCGGTCC TCGCCGTGCC TGTGCGCACC TGCAGGCGGG AGAGCGGCCC GCACCGCTCC CCTATGCTGC CCCGGGGCTC TCTCCTCTCG CTCGCCGCCT GTGCGGTCGT GATCGTCGCG GTCTCCGGGA CGTACGGCGT CTTCGACCCC TACCTTCCGG TCTACCTGCA TGCGGTCTTC TCCGCGTCCC CGGCGACGAT CGGGGTCGTC TTTGCGGTAC TGGCGGTTGC GGCCATCCTC GCCCAGCCGG CTGCAGGAAG GATCTTCGAC CGGTACGGCG GCAGCCGCTA CCTCATCGGC GGCGGCCTTC TCCTCGCGGG GGGTGCGACT GTCGCCGCCA TGCAGGCGGG CTCTCTCCCG CTCACCGCCG CCGCCGTCTT CGTGCTGGGG GTCGCGCTGA GCTGCGCCCT GGTGCCGACG ATGCCGCTCC TCGCCGATAT CTACCGCGAC CACGGATCGC AGGGTGCCGC TTACGGCATG TACAACACCT TCTTTGCCAT AGGGCTCTCG GCAGGGCCGT TTGCAGGAGC CGTCCTCGCC GGCCGGTGGC CGCTGCCGGC GATCTTCCTC GGGCTGGCGG CGTTCCTCGG GGTTACGGGA ATCCTGAGCG GGCTTGCCTT CGGGAGACTT ACGCAACGGT GA
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Protein sequence | MTTEKPHRLR TLRNRIAASP DAILVLVVLV IFMDMMIYGL LIPVFPQYAP RLGVGESVIG IIFGIYAGML LLFSIPMGLL SDRVGRRPLI VAGMLLLALA TALFGFSTTI THLVAARTVQ GVSAAATWSA GLALLADTCD PARLGEKMGV ALSAVGVGTI LGPVAGGLLF EYAGYTATFL IPAALAASVG LAVLAVPVRT CRRESGPHRS PMLPRGSLLS LAACAVVIVA VSGTYGVFDP YLPVYLHAVF SASPATIGVV FAVLAVAAIL AQPAAGRIFD RYGGSRYLIG GGLLLAGGAT VAAMQAGSLP LTAAAVFVLG VALSCALVPT MPLLADIYRD HGSQGAAYGM YNTFFAIGLS AGPFAGAVLA GRWPLPAIFL GLAAFLGVTG ILSGLAFGRL TQR
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