| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0524 |
|---|
| Symbol | |
|---|
| ID | 4847075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 507276 |
|---|
| End bp | 507827 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640115203 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_001046439 |
|---|
| Protein GI | 126178474 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0170] Dolichol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCACG AGTCGCTCCG GCAGGTCGTC CACCTCATCT TCGGTCTCGG GATTGCAGGT
TTCGTCCTCC TCTTCGACCG CGATCTCGTC CTCTCCGTCC TCGTGCTCGC TCTCTTCGCG
GGGTTCATCC TCTCCGACGC CATCTCCCGG GGCTACACCA TTCCGGTCGT CTCGCCGATC
ATCGCCGGTC TCGAGCGACG CGACGCCGCC CCCGGGAAAG GAGCGCTCTT CTTCGCGCTC
GGCGCTCTCT TCTGTATCGC CTTCTTTGCA CAAGAGGTCG CCTTCATGGG GCTCGTCGTG
CTCTCGCTCC TCGACAGCGT CACCACCCTT GCCGGCGTCC GGTTCGGCAG AATCCGGGCC
TATAATCACA AATCGCTCGA AGGCACACTC GCCGGGTTCG CGGCGACGGC GATCGTGCTC
TCGCTCCTCG TCCCGCCCGG GGTAGCCCTC CCGACCGCGG CAGCCGCGGC CGTCGCCGAA
CTGGCGAGCC CCGTGGACGA CAATCTCGTC GTCCCGGTCG TGGCCTGCAT CGCCCTCACG
CTGCTGCTCT GA
|
|---|
| Protein sequence | MMHESLRQVV HLIFGLGIAG FVLLFDRDLV LSVLVLALFA GFILSDAISR GYTIPVVSPI
IAGLERRDAA PGKGALFFAL GALFCIAFFA QEVAFMGLVV LSLLDSVTTL AGVRFGRIRA
YNHKSLEGTL AGFAATAIVL SLLVPPGVAL PTAAAAAVAE LASPVDDNLV VPVVACIALT
LLL
|
|---|
| |