| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0519 |
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| Symbol | |
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| ID | 4847903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 502202 |
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| End bp | 503797 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115198 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001046434 |
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| Protein GI | 126178469 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACATT CGGAGGACCC AGGGAGTGCG TTACACACCG CAGCGCCGGA GCGGGTGGCT
CATGAACGCA TGGCAGCCAT CCTGGCCGAG AACGAGGCGC TCCGGCACGA AAACGCCGTG
CTGCAGTCCG TAAAGGACGC CTTCCAGGAG AGCGAGAAAC GTTACCGGCG GCTCTTCGAG
GACGATCTTA CCGGGGACTT CCTCACCGAC GCGGATGGCC TGATACTCGC CTGCAACCCG
GCGTTCGTCA GGATGTTCGG GTTTGCTTCC ATAGAAGGTG CACTGGGTAC CAATATCCTG
GAGCTCTATG AGGATCCCCG TGACCGCGAG ACGCTCCTCG CACGCCTGCA GAGGGACGGA
AAAGTCGAGA ACGAGGGCCG GATCCGGAAG CGCCGGGACG GGACCCGCCT TCACGTCGTG
GAGAACGTGG TCGGATACTT CAGCGCGGAT GGCGAGCTGC TCGAGACCCA GGGTTACGTT
TACGACGATT CGGAGCGCAA GCGGGCAGAG GAGGCTCTCC GGGAGAGCGA GGGTCGGTTC
CGTGCGGTCC TCGAAAACTC GCTCGATGCG GCCTACCGGC GCAACCTCCG GGCGGACCGC
TATGACTACA TTAGCCCGGC CATCGAGGAG ATCCTCGGTT TCACCCCGGA GGAGATGAGC
GCGGTGAACC TTGAGGAGGT CATGGAGCGC ATCCATCCCG ACGACCGCCC GCCGGTCGAG
GCGGAACTGA ACGCTGCTGC CGCCTCAGGG AAAGGGCTCC TCATATACCG GTTTCTGACG
AAAAACGGGG AATACCGCTG GCTTGAGGAT CACCTCATGG TGATCTGTGA TCCCGGCGGC
CGGCCGCTCT ACCGGGGCGG CATCGTCCGC GACATCACCG GGCGGAAGGA GGCCGAGGTG
GAGCTCGCCC GGGTACACCG GGATCTCGAG TCCGCTCACC GGGAGACGAA CCTCTACCTG
GATATCCTGA CCCACGACAT CGGGAACACC GAGAACGTCT CGAACCTTTA CGCCGAGCTG
CTTGTCGACT CCATAAGAGG CGAGGCGGCT GTATACGTGG TGAACCTGAA GCGAAGCATA
GCAAAGAGCA TCGAGATCCT CGGCATCGTC TCCAAGATCC GGCGGATTCA CGCAGGACCG
CCCGAGCTCC GGTCGGTCGA CCTCGATGCG GTTATTCGAA CCGAGATCGA CCACTTTCCG
GCCGTCCCCA TCACCTACGA GGGTGCATTG TGCGAAGTCG TTGCCGACGA TCTCCTCTGC
GAGGTCTTCA CGAACCTGAT CGGCAACGCC GTCAAGCACG GCGGCCCCGG CGTCGCCGTA
ATCGTCCGGG TCGAAGAGCA GAACGGCGAG GTGCTGGTGA CGGTCGCGGA TACCGGCCGG
GGCGTCCCGG ACGACCAGAA AGAGGAGATC TTTCACCGCT ACGAGAGGAA GCAGCGGGGC
GTGGGCGAGG GGCTCGGGCT GTACCTCGTG CAGATCCTCA TCGATCGCTA CGGCGGTCGG
ATCTGGGTGG AAGACCGGGT GCCCGGGCAT CCGGAAGAGG GGGCGGCGTT TGTCTTCCTG
CTCAGGGAAG CGGACAGCGT GCCGGCGCGG CCGTGA
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| Protein sequence | MAHSEDPGSA LHTAAPERVA HERMAAILAE NEALRHENAV LQSVKDAFQE SEKRYRRLFE
DDLTGDFLTD ADGLILACNP AFVRMFGFAS IEGALGTNIL ELYEDPRDRE TLLARLQRDG
KVENEGRIRK RRDGTRLHVV ENVVGYFSAD GELLETQGYV YDDSERKRAE EALRESEGRF
RAVLENSLDA AYRRNLRADR YDYISPAIEE ILGFTPEEMS AVNLEEVMER IHPDDRPPVE
AELNAAAASG KGLLIYRFLT KNGEYRWLED HLMVICDPGG RPLYRGGIVR DITGRKEAEV
ELARVHRDLE SAHRETNLYL DILTHDIGNT ENVSNLYAEL LVDSIRGEAA VYVVNLKRSI
AKSIEILGIV SKIRRIHAGP PELRSVDLDA VIRTEIDHFP AVPITYEGAL CEVVADDLLC
EVFTNLIGNA VKHGGPGVAV IVRVEEQNGE VLVTVADTGR GVPDDQKEEI FHRYERKQRG
VGEGLGLYLV QILIDRYGGR IWVEDRVPGH PEEGAAFVFL LREADSVPAR P
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