| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0488 |
|---|
| Symbol | |
|---|
| ID | 4845920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 473768 |
|---|
| End bp | 474514 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115167 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001046403 |
|---|
| Protein GI | 126178438 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1693] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.105289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCTC CCCTGAAGTT CACCAACCAT CGCATCGAGG AGTACGCGCT CAAGGTGACC
TACCGCCCGG AGGATGACAC GGGAAAGATC ATCTACAACC TCTCGCTCAT CGAGAGCCGC
GACCTCGAGT TCGCGCTCTC CATTATGAAA GAGGCGCACA AACGGGGCAT CACCATCAGC
GACCGGCTCC TGGTCGCCGG GCCCGGGGGG CAGGTCGCCG GCTACACCGT CCCGGACGGC
CGGCACGCCG TCTGTACGAT GTGCAGCATT ACGCTCGACG CTCTTCTCCT CCAGCGCGGT
ATCCCGGCGA GCCCAATCGG AGGCGGGATC GTCGAGGTCG ACGGGAGAGT TGCGCAGCGG
TTCACGAGCA TGATCCTCTA CCGCGACACC ACGCTCGACC CTCTCGAGGT TCTCATCTCC
CAGGAGGCCA CGTCGATCCT CGACGTCATG CGCCACGGAA AGGGCAACAT CCTCGCAAAC
ATCAGAGAGT GCCACATGGA GGCCGAGCAG CTCCTTGGGA CGGTGCTCGA CGAACTTTCG
GCCATAGGGT TCTCCGGCAT CCTCGATGTC GGCGCTCCGA ACGTTCCCCT GCTGGGTGTC
CCGGTAAGCC CGCAGTACAT AGGCGTGGCA ATGGTCGGGG GCACGAACGC GATGGCGGCC
GTCAGGGAGG CGGGAAAACC GGTGGTGACC CGGGCGCTCA AAGGATTGAT CGATATCCGG
GAGATGGACT ACCTGGACGA TTACTGA
|
|---|
| Protein sequence | MHAPLKFTNH RIEEYALKVT YRPEDDTGKI IYNLSLIESR DLEFALSIMK EAHKRGITIS
DRLLVAGPGG QVAGYTVPDG RHAVCTMCSI TLDALLLQRG IPASPIGGGI VEVDGRVAQR
FTSMILYRDT TLDPLEVLIS QEATSILDVM RHGKGNILAN IRECHMEAEQ LLGTVLDELS
AIGFSGILDV GAPNVPLLGV PVSPQYIGVA MVGGTNAMAA VREAGKPVVT RALKGLIDIR
EMDYLDDY
|
|---|
| |