| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0461 |
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| Symbol | |
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| ID | 4846305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 448680 |
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| End bp | 450461 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115139 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001046376 |
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| Protein GI | 126178411 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0535363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGG AATCAACGAT CAGGACCCCC ATCGTCTGCG TGATGGGCCA CGTAGATCAC
GGCAAGACAT CGCTCCTGGA CCGGATCCGG GGCTCGTCCG TGGTATCTAC CGAAGAAGGC
GAGATTACAC AGCACATCGG TGCCACGCTT GTTCCTATCG ATGCAGTCAC CCGCATGGGC
GGAGCCCTGA GCAAGGTCAG CGTCAACGTC CCGGGCCTCC TCTTCATCGA CACCCCCGGC
CACCACGCCT TCACCACCCT TCGTGCGCGC GGCGGGGCGC TTGCCGACAT GGCGATCGTC
GTGGTGGACA TCAACGAGGG CTTCCGCCCC CAGACGATCG AGGCGCTCCA GATCCTGCGC
AACTACAAGA CGCCGTTCGT CATCGCGGCA AACAAGGTCG ACCGCATCCA CGGCTGGCGC
GTCCAGGAGA ACCAGCCGTT CCTGAAGACG TTTGCGCAGC AGAACGAGCG CGTCCAGGGT
ATGGTCGAGA CGAAAGTATA TGAACTCGTC GGCAAACTCT CCGACCTCGG GTTCAACTCC
GAACGGTTCG ACCGGGTCTC GGACTTCGCG CGGAACATCT GCATCGTCCC GACGAGCGCC
CTCACCGGGG AAGGCCTTCC CGACATCCTC ATGGTGCTGA TCGGGCTTGC CCAGCGTTAC
ATGACCGAGA GCCTCAAGGT CAGCGCCGAC GGCCCCGGTG CCGGCACCGT GCTCGAGGTG
AAGGAGGAGC GGGGGCTCGG GATGACGCTT GATCTGATCC TCTACGACGG CACCCTCAAG
GTCGGGGACG AGATCGTCGT CGCAGGAAAC GACCAGATCA TCGAGACGAA AGTGCGCTCG
CTCTTAAAGC CCCGCCCGAT GAGCGAGATC CTGATCGAGG AACGGTTCGA ACGGGTCAAA
TCCGTCACCG CCGCTGCGGG CATCAAGGTC GCCGCCCCGA AACTCGACGG GGTCATCGCG
GGCTCCCCCC TCCGGGCCGT CCGGAGCGGC AACCGGGACG AGGTGATCGA GCAGGTCCGG
CGTGAAGTCC AGGACATCGA GGTGAATCTC TCCGATGTCG GCGTCATCAT CCGGGCGGAT
ACCATCGGCG CCCTCGAAGC GCTCTCGAAG GAACTCGAGG GTCACCAGAT CCAGGTGATG
CGGGCGACCG TGGGGCCGGT CACCCGCCAC GACGTCATCG AGGCGGGAAC GATCAAGGAC
CCCCTCTACA GCGCGATCAT CGCCTTCAAC ACCCCCGTGC TACCGGACGC GGTCGATGCC
CTCGCGGATA CGGCGATGTC CCACGTCAGC ATATTCGAGG GCGGGGTCAT CTACCAGCTC
ATCGACGACT ACGTCGAGTG GCGCGACGAG AAGAAACAGG AACTCGAGCG GCAGAAGTTC
GAGAAGCTGA TCATGCCCGC GAAGATCCGG ATCCTCCCGA ACTGCGTCTT CCGGCAGAGC
AACCCGGCGG TGGTCGGCGT CAGGATCCTC GGCGGGAAAC TCCAGAGCGG GGTCGACCTC
GCCCTTCCGA ACGGCAAGAA GATCGGCCGC ATCAAGCAGA TCCAGGCAAA GAACGAGACC
GTCCAGGAGG CGGAGGCGGG CAAGGAAGTG GCGATCTCGA TCGAAGGGCC GACGGTCGGC
CGCCAGATCA ACGTCGACGA CGATCTCTAC GTCGACATCC CGGAGCGGCA CGTGAAGGTG
ATCGAGCGGG AGGTGATCGA TCACTTAAGC CCGAGCCTGC GCGAGACCCT GGAGGAGTTC
ACCACCCTCA AGCGCCGGGA AGACCCCTTC TGGGGGAAGT GA
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| Protein sequence | MAKESTIRTP IVCVMGHVDH GKTSLLDRIR GSSVVSTEEG EITQHIGATL VPIDAVTRMG
GALSKVSVNV PGLLFIDTPG HHAFTTLRAR GGALADMAIV VVDINEGFRP QTIEALQILR
NYKTPFVIAA NKVDRIHGWR VQENQPFLKT FAQQNERVQG MVETKVYELV GKLSDLGFNS
ERFDRVSDFA RNICIVPTSA LTGEGLPDIL MVLIGLAQRY MTESLKVSAD GPGAGTVLEV
KEERGLGMTL DLILYDGTLK VGDEIVVAGN DQIIETKVRS LLKPRPMSEI LIEERFERVK
SVTAAAGIKV AAPKLDGVIA GSPLRAVRSG NRDEVIEQVR REVQDIEVNL SDVGVIIRAD
TIGALEALSK ELEGHQIQVM RATVGPVTRH DVIEAGTIKD PLYSAIIAFN TPVLPDAVDA
LADTAMSHVS IFEGGVIYQL IDDYVEWRDE KKQELERQKF EKLIMPAKIR ILPNCVFRQS
NPAVVGVRIL GGKLQSGVDL ALPNGKKIGR IKQIQAKNET VQEAEAGKEV AISIEGPTVG
RQINVDDDLY VDIPERHVKV IEREVIDHLS PSLRETLEEF TTLKRREDPF WGK
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