| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0437 |
|---|
| Symbol | |
|---|
| ID | 4846296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 422353 |
|---|
| End bp | 423279 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640115113 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001046352 |
|---|
| Protein GI | 126178387 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1665] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.347736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCGA TACGGCTCCG TGACTTCATC GAGGATCGCG AGGGCTGCCT CTATGCGGTC
TCGAACTACG ACAACGCCGA ACGGATCGGG TGCATCCTCC GCTACGTCCC CGATCCGGAC
GGGGAGCGGA CGAACCTCGC CGGTCGGCGA TACCATAAAT ACGATTTTGC CGAGTCTTTC
GACTGGATCA GGGCGCACAA GCCGGAGTAC CTGGACAGCG TCCACCGGGT GCCCTACTGC
GATGTGGCCC GGGTCTACAA GCCCGAGGAG GAGATCGCCG GCGTGGCGGC CCGGAACAGG
CGGGTGGCAA GGCTCCTCGC TCACCTGGAT CTCCCGGCGG GCTCGTTCGG GTGCACGGGT
TCGCTCCTCT GCGGCCTCGA GAACGGCGCT TCCGACATCG ACCTGGTGGT CTACGGCGAC
GCCTGGTTCG TCGCGCAGCG CCGGCTTCGC GACCTCGTGG AGAGGGGGGC GATCCCGGGG
ATGAGCACCG CGATGTGGCG GAAGGTCTAC GACAAGCGGG TGCCCGAGAT ATCCTTCGAC
GCCTTCGTCC TGCATGAGCA GCGGAAGTGG AACCGGGGGG AGTTCGAGGG AACCTACTTC
GATCTCCTCT ACACCCGGGA CTACGGGAAT CTGGACGCGA TCCCGGCCGG CGCGGGGAGG
GTTCTCGGCC GGGCGACGAT CGAGGCGACG GTCACCGGCG CGTCGCTCTC CTTCGACAGC
CCGGCGGTCT ACGCGGTGGA TCACGATGAG ATCTCCCGGA TCCTCTCTTT TACCCACACC
TACTCGGGCC AGGCGCTCGC GGGGGAGGTC ATCGAGGCGA AGGGCGTCGT GGAGGAGCAC
GGCGACGAGC GGTGGCTGAT CGTCGGGACG ACCCGCGAGG CGAAGGGCGA GTACATCGTC
TCGAAGACGC TGCTCGAGAG CGTTTAG
|
|---|
| Protein sequence | MSSIRLRDFI EDREGCLYAV SNYDNAERIG CILRYVPDPD GERTNLAGRR YHKYDFAESF
DWIRAHKPEY LDSVHRVPYC DVARVYKPEE EIAGVAARNR RVARLLAHLD LPAGSFGCTG
SLLCGLENGA SDIDLVVYGD AWFVAQRRLR DLVERGAIPG MSTAMWRKVY DKRVPEISFD
AFVLHEQRKW NRGEFEGTYF DLLYTRDYGN LDAIPAGAGR VLGRATIEAT VTGASLSFDS
PAVYAVDHDE ISRILSFTHT YSGQALAGEV IEAKGVVEEH GDERWLIVGT TREAKGEYIV
SKTLLESV
|
|---|
| |