Gene Memar_0185 details

Gene Information

• Locus tag: Memar_0185
• ID: 4847957
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 167803
• End bp: 168279
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640114855
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001046101
• Protein GI: 126178136
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCGA CCATCGACGG GGTGGCCATT AAAAACTTAC GTCTCATTCC GGACGAGCGC 
GGATGGCTCA TGGAGATCCT CCGGTGTGAT GACGCCATTT TCGAGAAGTT CGGGCAGGTC 
TACTGCACGA CTGCATACCC CGGGGTTGTG AAAGCCTGGC ACTACCATAA AAAACAGACC 
GACAACTTCA CCTGCGTCCA CGGGATGATG AAGGTCGCGC TCTACGATGC ACGGGAGGAT 
TCGCCCACCC GGGGGAACCT CATGGAGTTC TTCGTCGGGG AGAAGAACCC GATCCTCATC 
AGTGTTCCGC CGGGCGTCTA TCACGGGTTC AAGGGAATCG GCACCGAGAC CGCGTTCTTC 
GTGAGCATCC CGACCCTGCC GTACAGCTAC GATGACCCGG ACGAGTTCCG GCTTCCGCCC 
GATACAAACG AGATCCCCTA TGACTGGGGT CTTACACCCG GGCTGAAACA CGGATAA 

 

Protein sequence

MKPTIDGVAI KNLRLIPDER GWLMEILRCD DAIFEKFGQV YCTTAYPGVV KAWHYHKKQT 
DNFTCVHGMM KVALYDARED SPTRGNLMEF FVGEKNPILI SVPPGVYHGF KGIGTETAFF 
VSIPTLPYSY DDPDEFRLPP DTNEIPYDWG LTPGLKHG