| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0108 |
|---|
| Symbol | |
|---|
| ID | 4845944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 100416 |
|---|
| End bp | 101123 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640114779 |
|---|
| Product | cobalamin synthesis protein, P47K |
|---|
| Protein accession | YP_001046025 |
|---|
| Protein GI | 126178060 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.83483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTCG CCGTCGTCGC CGGTCCGCCG TCGGCCGGGA AGACCGCCGT CGTGCGGCAG
ACCATCCGCT CTCTTCTGGA CCGGTACCGG ATCGCTTACC TGAAGATCGA CGTCGTCCGG
GCGTTCGAGG ACGAGGAACT CGCGGCCGAG TTTTCGATCC CGGCACGGAA GGTCTGCTCC
GGCGACCTCT GCCCGGACCA CGCCGGGGTG ATGGTGATGC GGGACGCCAT CGCCTGGGCC
GAGGGGGAGG GCGCCGACCT CCTCCTGGTC GAGAGCGCCG GGCTCTGCCT GCGCTGCTCT
CCCTACACGA CGCAGGCGCT CGGGATCGTC GTCCTTTCCG CCGTATCGGG GACGAACACG
CCCCTGAAGA TGGCCGCGAT GCTCGCGCTC GCCGACATCG CGGTCGTGAC CCGGATTGAT
CTCGTCTCCC AGGCCGAGAA GGAGGTCTTC CGGGAGCGGA TCCGAGAGGT GAACCCGGAC
CTCGATATCG TGGAGACGAA CGCCGTCCAG GGGACCGGGA TGCGCTACCT CCTCCGGGCG
ATCGAGGGCT GTCCGCCGAT AACCGATCCC GATACGATCG TCCTCCGGGG TGCGCCGCCG
CTCGGGGTCT GCACCCTCTG CATCGGGAAG ACCGAGATCG GATGGCAGAA CCACTTCGGG
GTCGTCCGGA GGCTCGAGGG TGCCGATTAT CTCTTCCGGG GGGACTAG
|
|---|
| Protein sequence | MRLAVVAGPP SAGKTAVVRQ TIRSLLDRYR IAYLKIDVVR AFEDEELAAE FSIPARKVCS
GDLCPDHAGV MVMRDAIAWA EGEGADLLLV ESAGLCLRCS PYTTQALGIV VLSAVSGTNT
PLKMAAMLAL ADIAVVTRID LVSQAEKEVF RERIREVNPD LDIVETNAVQ GTGMRYLLRA
IEGCPPITDP DTIVLRGAPP LGVCTLCIGK TEIGWQNHFG VVRRLEGADY LFRGD
|
|---|
| |