Gene Mchl_5054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5054 
Symbol 
ID7118928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5408023 
End bp5409384 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content73% 
IMG OID643527748 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002423747 
Protein GI218532931 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.606706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC GCGAGAGACT TCTGGCGGCG GGCGGACTCG AGGGCCTGGT CCTGTCCGAC 
TACCGCAGCA AAAAAGATCT CGCCGGGATC GTCTCCGGCG AGCGCGACGC CGCCGCCACC
GCGGCGCTCG CCGGCCGCCG GGTTCTGCTC GCGGTCGGCG GGCAGATGGC GGCGGCCCGC
GCCATGATCG CGCTCGACGG CCTCGCGGCT CGGCTCGCCC TCGTCCCCCC GAAGCTCGCG
CCGGAGCACA TCGCCCGGAT CGCATCGGAT TCCGAGGCGG AGATCTGCGT CACCGATGCC
GAGGGGCTGC CCCCCGACGC CCTGCCGGGC CTGCCCCGGA TCGACGCGGC CGAGGCGTTC
CGCGCGGGCT GCGAGACATC GCGGGAGACG GAGTGGGCAT TGGCCACCTC CGGCACCACC
GGCGCGCCGA AGCTCGTCGC CCACACCCTC GAAGGCCTCG CCGGCGGCAT CAACACCGCT
GCGGCGCCGG AGCCCGGCAC GGTGTGGAGC ACCTTCTACG ACATCCGCCG CTACGGCGGC
CTCCAAGTGT TCCTGCGGGC GATGCTCGGG CCGTCCTCGC TCGTGCTCTC CGACGCGGGC
GAGGCGGTGC GCGACTATCT CGTCCGCGTC GGTGCGGCGG GCGTCACCCA CATCCTCGGC
ACGCCCTCGC ACTGGCGCCT CGCCCTGATG AGCGCGGCGC TCGACCGACT GAGCCCCCGC
TACGTGCGGC TCTCGGGCGA GATCGCCGAC CAGAACATCC TCGACGCCCT GCGCGACGCC
TTCCCTGAGG CGCGCATCGC CCACGCCTAC GCCTCGACCG AGGGCGGGGT CGGCTTCACC
GTCGAGGACG GGCAGGAGGG TTTCCCGGCC GCGCTGATCG GCACCCGCGC CGGGATCGAG
ATCACCGTGC GCGAGGACAG CCTGTTCGTG CGCTCCGGCC GAACCGGGCG GCGCTATCTC
GGCGCGGCGC CCGAGGCGCT GATCGCCGGG GACGGCTTCA TCGACACCGG CGACCTCGTG
GAGCGACGGG GCGAGCGCTA CCACTTCCTC GGCCGGCGCA GCGGCGTGAT CAATGTCGGC
GGCGCCAAGG TGCAGCCGGA GGAGGTCGAA ACCGTCATCA ACGTCTTCCC CGGGGTCTCA
ATGTCCCGCG TGCGCGCCCG GCCCAACCCG ATCCTCGGCG CGGTGGTCGA GGCGGAGGTG
GTGTTGCGTG CCGACGCGGG CACGGATCGG GCGGCGCTGA AGAAGGCGAT CATCGCTCAT
TGTCGCCCGC GCCTGGCCGG ACACAAGGTG CCGGCGAGCG TGAAATTCGT GGATGCGCTG
CCGATCACGT CGGGCGGCAA GCTGGTGCGG AGGGGCGCGT GA
 
Protein sequence
MILRERLLAA GGLEGLVLSD YRSKKDLAGI VSGERDAAAT AALAGRRVLL AVGGQMAAAR 
AMIALDGLAA RLALVPPKLA PEHIARIASD SEAEICVTDA EGLPPDALPG LPRIDAAEAF
RAGCETSRET EWALATSGTT GAPKLVAHTL EGLAGGINTA AAPEPGTVWS TFYDIRRYGG
LQVFLRAMLG PSSLVLSDAG EAVRDYLVRV GAAGVTHILG TPSHWRLALM SAALDRLSPR
YVRLSGEIAD QNILDALRDA FPEARIAHAY ASTEGGVGFT VEDGQEGFPA ALIGTRAGIE
ITVREDSLFV RSGRTGRRYL GAAPEALIAG DGFIDTGDLV ERRGERYHFL GRRSGVINVG
GAKVQPEEVE TVINVFPGVS MSRVRARPNP ILGAVVEAEV VLRADAGTDR AALKKAIIAH
CRPRLAGHKV PASVKFVDAL PITSGGKLVR RGA