| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5004 |
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| Symbol | |
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| ID | 7115002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 5351369 |
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| End bp | 5352142 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643527698 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002423697 |
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| Protein GI | 218532881 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.752679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG ACATGAGCGA CGAAAGAAAA TCCGTCCTCG TCGTCGGCGG CGCCTCCGGA
CTTGGTGCGG CCACCGTCCG CGCCCTGGCG GCAGCCGGCC ACGCCGTCAC CTTCACCTAT
CGCTCCTCGC CGGAGCGGGC GCAGGCGCTC GCCGACGAAC TCGTGCCGAT GCACGGCGAA
GGCAGCGTCA CCGCCCGCGC CCTCGACCTG TCGGACCGCG ACGCAGTGGA GGCGTTCTGC
GAGTGGGCCG AGGGCCAGGG CTTCTACGGC TACGTCCACA ATGCCGGCCA GTCGGCGGAC
GCGCTGGCGG CCATGCTCGA CCGTGAGCGG GCCGAGGCGG CGATGCAGGT GAACTTCTGG
TCGATGACCC GGATCGCCAA GGCGCTGGTG CGTGGGATGA TCCGGGCGCG CGCCGGCCGC
ATCGTCGCCA TCGGATCGGT GGCCGCGCTC CAGGCCAATG CCGGCAACGC GGCCTACGCG
GCGACCAAGG GCGCCCTGAT CGCCTATTGC CGCACACTGG CGATCGAGTC GGCCAAGCGC
GGCGTCACCG TCAACGTCAT CGCGCCCGGC TTCATCGATA CTGAGATGCT GGCAGCCTAT
GCCAGCCACC GCGAGGGGAT CGAGCGCCAG ATCCCGCTCG GACGTTTCGC CAAGCCGGAA
GAGGTCGCGG CGATGGCTGC CTTCCTGATC GGGGAGGGCG GGGCCTACAT CACCGGCGCG
GTGCTGCCCG TCGATGGCGG CTTGACCGCG ATGATGGGCA TCCACCGCAC CTGA
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| Protein sequence | MSADMSDERK SVLVVGGASG LGAATVRALA AAGHAVTFTY RSSPERAQAL ADELVPMHGE
GSVTARALDL SDRDAVEAFC EWAEGQGFYG YVHNAGQSAD ALAAMLDRER AEAAMQVNFW
SMTRIAKALV RGMIRARAGR IVAIGSVAAL QANAGNAAYA ATKGALIAYC RTLAIESAKR
GVTVNVIAPG FIDTEMLAAY ASHREGIERQ IPLGRFAKPE EVAAMAAFLI GEGGAYITGA
VLPVDGGLTA MMGIHRT
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