| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4955 |
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| Symbol | nirA |
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| ID | 7114952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 5289454 |
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| End bp | 5291244 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643527648 |
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| Product | ferredoxin-nitrite reductase |
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| Protein accession | YP_002423648 |
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| Protein GI | 218532832 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.463777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.237045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG AATTCAACGC CGAGCAGAAG CGCTACCTGG AGGGCTTCGC CTCCGGCATC
GCCGCGGCCC GCATGACCGG CGGCCTCGCC GCGGGCCAAG CCCCGGCGAG CGCACCAGCC
GAGCCCACGG GCCCGGACGC GATCCACATC AAGGCGCAGA TCCGCACCGT GAAGGAGGGC
GGCAAGCTCT GCGACCAGGA GAAGTGGAAG CGCGCCGAGA ACCCGTTCGA CGGCCATAAT
CGGCTGAAGG CGGAGGCCGC CACGGGCAAG GCTCCGAAGC CCGAGGACAA TTTCCGCTGG
CGCTACCACG GCATGTTCTG GGTCGCGCCG ACCCAGACCT CCTACATGTG CCGGATCCGG
GTTCCGAACG GCATCCTGAA CCACTGGCAG TTCGCCGGCC TCGCCGACCT CGCCGACGCC
CATGGCGGCG CCTACAGCCA CGTCACCACC CGCGCGGGCC TGCAGGTGCG CGAGATCGCG
CCCGAGCACG CCCAGCCCTT CCTCGACGGG CTGATCGACC TCGGCCTGAC CGCGCAGGGC
GCAGGCGCCG ACAACATCCG CAACGTCACC GGCTCGCCCG CCGCCGGCAT CGACGCGCAG
GAACTGCTGG ACACCCGGCC GCTCACCAAG TCCTGGCACA ACTGGATCCT GAACGACCGC
TCGCTCTACG GCCTGCCGCG CAAGTTCAAC GTCTCCTTCG ACGGCGGCGG CGTGATGCCG
GCGCTCGAAG AGACGAACGA CATCGGCTTC CAGGCGATCC AGGTGCTGGA GGGCGCGCCG
GTCGCGCCGG GCGTCTGGAT GCGCCTCGTG CTCGGCGGCA TCTCGGGCCA CAAGGATCTG
GCCCGCGACA CCGGCATCGT CCTCCGGCCG GAGGACTGCA ACCTTGTGGC CGACGCGATC
ATCCGGGTCT TCATCGAGAA CGGCGACCGG ACCAACCGCA ACAAGGCCCG GATGAAGTAC
GTCCTCGATG CCTGGGGCTT CGACAAGTAC ATCGCCGCGG TCGAGGAGAA GCTCGGGCGC
AAGCTCGACC GGGTCGACGC CGCCCATGTC GCCCCGCGCC GGCCGACCGA CCGCTTCAGC
CATGTCGGCG TGCACGCCCA GGTCCAACCC GGCCTGAACT GGGTCGGCGT GGTGCTCCCC
GTCGGCAAGA TGACCACCGA CCAGATGCGC GGGCTGGCAA AGATCGCCGC GGAATGCGGC
GACGGCCAGA TCCGCATGAC GGTCTGGCAG AACTTCATCT TCTCCGGCGT GCCGGACGCG
AAGGTGGCCG AGGTCGAGGA ACGGGTGCTC GCGCTCGGGC TCACCGTGAA GGCCGCCGGC
ATCCGCTCGG GCCTCGTCGC CTGCACCGGC TCGCGCGGCT GCAAGTTCGC CGCCTCCGAC
ACCAAGGGCC ACGCGATGAT CATCGCCGAT CATGTCGAGC GGACCGTGCC GAACCTCGAC
GTGCCGGTGA ACGTGCATCT CACCGGCTGC CACCATTCCT GCGCCCAGCA CTACATCGGC
GATATCGGCC TGATCGGCGC CAAGGTCGTC GTCTCGGAGG AGGGCGACAC CGTCGAGGGC
TACGATGTCG TGGTCGGCGG CGGATTCGCC GAGAACCCGA AGATCGGCAC CGAGATCTGG
AAGGCGGTGA AGGCCGAGGA CGCGCCCTCG CGCGTCGAGG CCCTGCTCAA CGCCTATCTC
GCCCGCCGCC AGGGCCCGGA GGAGAGCTTC CAGGCCTTCA CCGCGCGCAC CGGCCCCGAA
GCCCTGCGCG ACGCCGCCGA AGAACAACCT GCCCTCAAGG CCGCCGCATG A
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| Protein sequence | MADEFNAEQK RYLEGFASGI AAARMTGGLA AGQAPASAPA EPTGPDAIHI KAQIRTVKEG
GKLCDQEKWK RAENPFDGHN RLKAEAATGK APKPEDNFRW RYHGMFWVAP TQTSYMCRIR
VPNGILNHWQ FAGLADLADA HGGAYSHVTT RAGLQVREIA PEHAQPFLDG LIDLGLTAQG
AGADNIRNVT GSPAAGIDAQ ELLDTRPLTK SWHNWILNDR SLYGLPRKFN VSFDGGGVMP
ALEETNDIGF QAIQVLEGAP VAPGVWMRLV LGGISGHKDL ARDTGIVLRP EDCNLVADAI
IRVFIENGDR TNRNKARMKY VLDAWGFDKY IAAVEEKLGR KLDRVDAAHV APRRPTDRFS
HVGVHAQVQP GLNWVGVVLP VGKMTTDQMR GLAKIAAECG DGQIRMTVWQ NFIFSGVPDA
KVAEVEERVL ALGLTVKAAG IRSGLVACTG SRGCKFAASD TKGHAMIIAD HVERTVPNLD
VPVNVHLTGC HHSCAQHYIG DIGLIGAKVV VSEEGDTVEG YDVVVGGGFA ENPKIGTEIW
KAVKAEDAPS RVEALLNAYL ARRQGPEESF QAFTARTGPE ALRDAAEEQP ALKAAA
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