Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4857 |
Symbol | |
ID | 7118309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 5167253 |
End bp | 5170663 |
Gene Length | 3411 bp |
Protein Length | 1136 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643527550 |
Product | helicase domain protein |
Protein accession | YP_002423550 |
Protein GI | 218532734 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.526105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.284005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCC GCACCCTTCA CCGCGAGGCC CGCGCGCGCG GGGTCACGGC GGTGCTCGGC CCGACCAACA CGGGCAAGAC GCACATGGCC ATCGAGCGGA TGCTGCTGCA TCCGACCGGC ATGATCGGCC TGCCCCTCAG GCTCCTGGCC CGCGAGGTCT ACCTGCGCGT GGTCGCCAAG GTCGGGTCCG AGAACGTCGC CCTCATCACC GGCGAGGAGA AGATCAAGCC GGACCGGCCA CGCTACTGGA TCTGCACCAT CGAGGCGATG CCGCGCGATC TCGATGTCGC CTTCGTCGCG ATCGACGAGA TCCAGCTCGC CGCCGACATG GACCGCGGCC ACGTCTTCAC CGATCGCCTG CTCTACCGGC GGGGCCGCGA GGAGACGCTG CTGATCGGCT CCTCGACCAT GCTGCCGCTG GTGCAGGCGC TGATCCCCGG CGTGCAGACG ACGACGCGCC CGCGTCTCTC GAGCCTGACC TTCGCGGGCG AAAAAAAGAT CTCGCGGCTG CCGCACCGCA CGGCGATCGT CGCCTTCTCG GCCGAGGAGG TCTACGCCAT CGCCGAGTTG ATCCGGCGTC AGCGCGGCGG CGCGGCAGTG GTGCTCGGCG CGCTCTCGCC CCGCACCCGC AACGCCCAGG TCGAACTCTA TCAATCGGGC GACGTCGATT ACCTCGTGGC CACCGACGCG GTCGGCATGG GGCTCAACCT CGACGTCGAT CACGTCGCCT TCGCCGCGAA CTGGAAATAC GACGGCACCC GCTTCCGCAA GCTGTCCCCG GCCGAGATGG GCCAGATCGC AGGCCGCGCC GGGCGCCATA TCGCCGACGG CACGTTCGGC TCGACAGGGC GCTGCCCGCC CTTCGAGCCG GAGATGGTCG AGGCGCTGGA GACGCACGAC TTCGAACCCG TGCGCATGCT GCAATGGCGC AACCCGGACC TCGAATTCGC TTCGCTGGAA CGGCTGCAGG CGAGCCTCGA CGAGCATCCG CACGAGCAGG GCCTCACCCG CGCGCCGATG GGCGAGGACC AGCAGGCGCT AGAGATCCTG ATGCGCGAGG ACGACATCCG CGACATGGCC AAGGGTCCCG CGGCGGTGCG CCGCCTCTGG GACACCTGCG GCGTGCCGGA CTATCGCAAG GTCCACCCGC AGACCCATGC CGACCTCGTG GCCCAGCTCT ACCGCTTCCT GATGCGCGGC ATGGCGGGGC GCATCCCCAA CGACTGGTTC GCCCGCCATG TGGCGATGAT CGACCGCACC GACGGCGACA TCGACGCCCT GTCCCAGCGC ATCGCGCAAG GGCGGACCTG GACCTTCGTG GCAAACAGGC CTGACTGGTT GCTCGATCCT CTGCATTGGC AGGGCGAGAC GCGTCGGGTA GAGGACAGAT TGTCCGACGC CCTGCACGAG CGCCTCGCGA GCCGCTTCGT CGATAGGCGC ACCAGCGTCC TGATGCGGCG CTTGAGAGAG AAGACGATGC TGGAAGCCGA AATCACCTCC GGCGGTGACG TCACCGTCGA GGGTCAACAT GTGGGCCGTC TTCACGGCTT CCAATTCGTG CCCGACCCGC AAGCCGAGGG CCACGAAGCC AAGACCCTGC GCTCTGCCGC CGACAAGGCG CTGGCCGGCG AGATCGAGGC GCGGGCCGAC CGCTTCGCCT CGGCCGCCGA CGCCTCGCTG GTGCTCTCGC ATGACGGCAT CATCCGCTGG ACCGGCGATC CCGTCGCCAA GCTGACGCCG GGCGACAAGC TGTTCGAGCC CGGCATCCGC CTCATCGCCG ACGACAGCCT GTCCGGCGCC GCGCGCGAGA AGGTCGAGAC GCGGCTGGCC GCATGGCTGC GCGCGCATGT CGTGCGCCTG CTCGGGCCGC TGATGGAGAT CGAGACGGCG GCCGACCTTA CTGGGCTCGC CCGCGGCATC GGCTATCAGG TGGTCGAGGC GCTCGGCGTG CTGGAGCGGG CCAAGGTGGC GCATGAGATG CGCACCCTCG ATCAGGACGG GCGCGCGAAT CTCCGCCGTC ACGGCGTGCG CTTCGGCGCC TACCACATCT TCCTGCCGGC GCTGCTGAAG CCGGCCCCGC GCACGCTCGC CGCCCAACTC TGGGCGCTGA AGAACGGCGG CCTCGACCAG CCCGGCCTCG ACGAGATCGC GCATCTGGCC AGTTCCGGAC GCACCTCGAT CAAGGTCGAT CAGAACATCG CCAAGGGCCT CTACCGCGCC GCCGGCTTCC GGGTCTGCGG CGAGCGGGCG GTGCGCGTCG ATATCCTGGA GCGGCTCGCC GACCTGATCC GCCCGGCCAT CGCCTACCGC CCCGGCACGA CCCCGGGCGA GCCGCCGGCC GGCACCGCGG ACGGCGACGG CTTCGTGGCG ACCGTGAACA TGACCTCGCT CGTTGGCTGC TCGGGCGAGG ATTTCGCCTC GATCCTGAAG TCGCTGGGCT ACGTCGCACA GAACCGTCCC GGCCCGGCCA TCACGGTGCC CCTGGTCGCG GCGGCACCGA CCGTCCCCGC CGCGCGCACC GCCGAGGCCG CACCGCAGGA GACGGCGGGC GAAGAGACCG CCGACGAGGC GACGGCGACC GAGGCGACAT CGGGCGAACA GACGCCAGCG GAGGAGACGG CTCAGGCCCC GTCGCAGGAC GCGACCGACG TCGGCGCCAC GACCGAGCCG AGCGACGAGA CGACGGCTGC CGAGGCGACG TCCGAGGCCG GGGGCGAAGC CGAGACGGTC GCCGCCGAAG CCGAGCCCGC CGCGGAAGAG GCGGCCACCG CACCGGCCGA AGCCGTTGCC CCGACCGAGG AATCGGCACC GGACGAGGCC GAGACGGCGG ACGCCGCTCC CGAAGCCGCC GCGCCGATGC CGGCCGAGAC CGCCGACGCC GCGCAGGCGG CTGCGGCGAC CGGAGAGGTC GAGGCGGTGG ACGCGGCCGA TTCGGCGATT CCGGCCGATG AGCCCTCCAC GGAGGCGGAC GCCGCCGCCG AGCCGGCCGC GCCCGAGACC GTCGAGGTGT GGCATCTGCA CCGTCCGCAG CGTCACACCG GTCCGCGGCC CGGCCGCGGC CAGGGACGGC CGGAGGGGCG CCAGGACGGA AGGCAAGAGG GCAGACAGGA CGGTCGCCAA GATGGTCGTC GTGGCGACGG CCCGCGCCGT CCCCGCGAGG ACCGTCCGGA GGGTGGACGT CCGGCCCGTG CCGACGGCAG GGGCGAGAGT CGCCGGGAAG GCCAGGGCGA AGGCGGCCCT CGCCGCGAGC ATCAGGGTGG CCGCAACCGC CCCGACCGCC GCGACGAGAA CCGCCGCCCG AACCCCGAGC AGCGCCCGCC GCGCCGCGAG CGCCAGCCCG ATCCCGATTC GCCCTTCGCG GCGCTCGCCG CGCTGAAGGC GAAGCTCGAA TCGGACGGGG GCAAGCGCTG A
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Protein sequence | MTLRTLHREA RARGVTAVLG PTNTGKTHMA IERMLLHPTG MIGLPLRLLA REVYLRVVAK VGSENVALIT GEEKIKPDRP RYWICTIEAM PRDLDVAFVA IDEIQLAADM DRGHVFTDRL LYRRGREETL LIGSSTMLPL VQALIPGVQT TTRPRLSSLT FAGEKKISRL PHRTAIVAFS AEEVYAIAEL IRRQRGGAAV VLGALSPRTR NAQVELYQSG DVDYLVATDA VGMGLNLDVD HVAFAANWKY DGTRFRKLSP AEMGQIAGRA GRHIADGTFG STGRCPPFEP EMVEALETHD FEPVRMLQWR NPDLEFASLE RLQASLDEHP HEQGLTRAPM GEDQQALEIL MREDDIRDMA KGPAAVRRLW DTCGVPDYRK VHPQTHADLV AQLYRFLMRG MAGRIPNDWF ARHVAMIDRT DGDIDALSQR IAQGRTWTFV ANRPDWLLDP LHWQGETRRV EDRLSDALHE RLASRFVDRR TSVLMRRLRE KTMLEAEITS GGDVTVEGQH VGRLHGFQFV PDPQAEGHEA KTLRSAADKA LAGEIEARAD RFASAADASL VLSHDGIIRW TGDPVAKLTP GDKLFEPGIR LIADDSLSGA AREKVETRLA AWLRAHVVRL LGPLMEIETA ADLTGLARGI GYQVVEALGV LERAKVAHEM RTLDQDGRAN LRRHGVRFGA YHIFLPALLK PAPRTLAAQL WALKNGGLDQ PGLDEIAHLA SSGRTSIKVD QNIAKGLYRA AGFRVCGERA VRVDILERLA DLIRPAIAYR PGTTPGEPPA GTADGDGFVA TVNMTSLVGC SGEDFASILK SLGYVAQNRP GPAITVPLVA AAPTVPAART AEAAPQETAG EETADEATAT EATSGEQTPA EETAQAPSQD ATDVGATTEP SDETTAAEAT SEAGGEAETV AAEAEPAAEE AATAPAEAVA PTEESAPDEA ETADAAPEAA APMPAETADA AQAAAATGEV EAVDAADSAI PADEPSTEAD AAAEPAAPET VEVWHLHRPQ RHTGPRPGRG QGRPEGRQDG RQEGRQDGRQ DGRRGDGPRR PREDRPEGGR PARADGRGES RREGQGEGGP RREHQGGRNR PDRRDENRRP NPEQRPPRRE RQPDPDSPFA ALAALKAKLE SDGGKR
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