Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4579 |
Symbol | |
ID | 7117974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 4852797 |
End bp | 4854143 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643527277 |
Product | O-antigen polymerase |
Protein accession | YP_002423282 |
Protein GI | 218532466 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.17078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCA CCAGCATGAC CGCCACCAGC CTGACCGACA CGAGTCTTCC GCCACAAGCC GTCCGGGCCG CGCCGTCGTC GATCGGGTTG TCCGGCGCGC GGTGGCGCGC GGCCTTCGTC GTCTTCGCGG TGCTGATGTG CGCGAACGCC TTCTACGTGC TCTTCCTCGG CAGCAACAAC AAGGTCGGCA ACACCAAGAC GCTGATGCCG TCGAACCGGA ACAACCTGCT CTATGTCGGG CTCTGGCTCT GCCTCTACGT CCTGTCCCTT GGCGTGGTGC TGCGGGACAT GCGGCGCAAC GGGATCGACC TCTGCCTGGT CGCCGTCCTT CCGTTCGCCG GCTACATCCT GCTCTCCACC TGCTGGGCGA CCGATAGCTG GGCGTCGCTG GTTCCCGCGG GGATGCTCGT CCTGAACATC GCCATCGCCG CGGCGCTGGC CTGCATCGTC CATCCGGCGG TGTTCCTGAG CCTGTACGCC TGGACCAACG TCTTCCTGGC GGCGTCCTCC CTGGTGATGG TGGTGGTGAT GCCCGATGCG GTGCGCACCG ACATCACCCG GCCGGGCCTG CTGATGTCGG GCGAACTGTT CGGCGCCTAC GGCAGCAAGA CCCTGCACGG CATGTCGGCC GCGAGCGCGA TGCTGATCCT GCTGTTCCTG CCCAGCGCGA GCCCGCGGGG CCTGCGCGGG CCGGCGCTCG GCATCCTCGC GCTCGGGCTG ATCCTGGCCA ACTCGATGTC CTCCGTGAGC GGCATTGCGG TGGCGGGCCT GACGCTCCTG GCCGCCCGGA TGCTGCCCGG CTGCGGCCGG GCCATCTTCG CGACGGTGAC CGGGTTCGCG ATCCTGCTCT CGCTCTTCCT GCCCTTCATC GGGGTCGGCG ACATCGCCGT CGCGCTCGGC CGCAGCCCCG ACTTCACCGG GCGCAGCAAC TTCTGGCCCT ACGCCCTCGA AGTCTTCCGC GATCGACCGG TGTTCGGCTA CGGCTATCTG AGTTTCTTCA ACACCGACCC GTTCTCGAAG GCATGGAATG TGTGGGAGCG GGAGATGTTC TTCTTCACGC CCGACTTCCA CAACACCTTC CTCGACACTC TGGTCGGCTT GGGCCTCGTC GGCGGCGCGT TCTATCTCGT CCTGCTCTTG GCCTCGTCCT GCATCTTCGC GCATCCGAGC CTTGAGCGGC GCACCGCCTT CCTGCTCTCG GCCCTCCTGA TCGCCTTCAT CCTCAACAGC GCGACCGGCT ACCTTTTCCT CGCGCACAAC CGGATGTCGA CGATCTTCCA GTTCTACTGC CTGTTCGTTC TCTGCCGCCG TTATCGGCCG CGCTTCCCGC AGCCGGCCAT CGCCTGA
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Protein sequence | MTATSMTATS LTDTSLPPQA VRAAPSSIGL SGARWRAAFV VFAVLMCANA FYVLFLGSNN KVGNTKTLMP SNRNNLLYVG LWLCLYVLSL GVVLRDMRRN GIDLCLVAVL PFAGYILLST CWATDSWASL VPAGMLVLNI AIAAALACIV HPAVFLSLYA WTNVFLAASS LVMVVVMPDA VRTDITRPGL LMSGELFGAY GSKTLHGMSA ASAMLILLFL PSASPRGLRG PALGILALGL ILANSMSSVS GIAVAGLTLL AARMLPGCGR AIFATVTGFA ILLSLFLPFI GVGDIAVALG RSPDFTGRSN FWPYALEVFR DRPVFGYGYL SFFNTDPFSK AWNVWEREMF FFTPDFHNTF LDTLVGLGLV GGAFYLVLLL ASSCIFAHPS LERRTAFLLS ALLIAFILNS ATGYLFLAHN RMSTIFQFYC LFVLCRRYRP RFPQPAIA
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