Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4237 |
Symbol | |
ID | 7117471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 4462032 |
End bp | 4463993 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643526942 |
Product | glycoside hydrolase family 5 |
Protein accession | YP_002422948 |
Protein GI | 218532132 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.162698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTCGCC GGTCCTTCCT GTCAGGTGTC GCTGCCTCGG TGATTGGGGG TGCTGCGAAC GCACAGCTCC CTCCGGCGCG CCTGTGTCCC AACTTTCGGT TTAGGAGCGC ACCCTCCATC TTGCCGTGGA ACAGGACCAC ATTCACCTCG AAGCGCAGCG TGAACATCGT AGCTATCGGG TTCAACCTTT ATGGCCGCTG GGGCACCGCG TCGTGGGACA TTTCTGCCAC CAACGCACGT CTGGCTGCTC TCAAGGCTTT AGGCTTTGAC GCGGTCCGCA TCGCCATCGA CCCGACCACG GCCCTGAACG GGGCGCAGAC GCATGCGCAG TGGTGGGCGG TCGCGCAGTA CGCCATTGAC AAAGCACTTG CAGAGGACCT CAACGTCATC GCCGACCTGC ACGTCGCCCT TGACGGGTCG CAATCCACGT ACCGCGCGGA TCAGATTGAG GCGGCCTATC CCAACGGTTT AGCTTGGGCT GCCTATGTCA ACCTGCTGCA ATACTTTGCC GCGCAGCTGG CGGGCTACAA TAACACCGAG GTCTGCGCCG AGATTTATAA TGAAAATATG CAGGATGTCG GCGGCGACTG GCCTGCGATG GCCAAGACTC TGTGGAATGC CTTCCGCGTT AAGAACCTGA ACACAACCGT TCTCGTCGGC GGGTCCAGTT ACTCGTCGGT TGACGGTCTG GCGGACCTGT TGGCTGCCAA TTTCGATGCG AACACTGGCT ATGTGGTTCA CGACTATGAG CCGGGTGTAC TCTCGCATCA GGGTGTCGGC GTCTATCAGC CCGTATCACG CCTGCACTAC CCGCCGATTT TCTCGGAGAA GGCGGCGGCT CTCGCCCAGG TGTTGGGCAA CAGCAGCCTG ACGGGACAGA TCAACAATTA TTTCGGCTCC TCACAATTCG ACGCGACCAC GATGAACGAT GGGTGGCTGG CAGCCAAAGT CGCGGTGGTG ACCGCTTGGC GCAAGGCAAA CGGCGTTCCG GCGTCCCGCA TCTTCATGAC GGAGACCGGC ATCCACAACG ACACGGACTT CAGGGGTGCA TCGCGTGTCG CGCGCCTTGG CTTCATTCAG ACGAAGACCC GCTTGCATGA GGCGGCGGGT CACTCGGTCG GCATATGGGC CTGGGATGGC TCTTATTGGG CCCTGCCGAG CGTCAACGCC GTTGATGCCG ATTATCAGGC CGCGCTCGGT CTCTCGGGTG GCATATTCTA CGAGACGGAA GCCTCCGCAC TGTTCGCCCG CATCACGATC CAGCCGTCTG CGATGCGGAA GGCGCTGATC AATGCCACGA TCAAGATGCT GAAGGATACC GGACTTTGGA CGAAGCTCGA TGCCTTCTAT ATGCTCGCAG CGGCGGATGA GCAGTCGGCC CGGCTGAACT GGAAGAGCGC GATGGGCAGC CTGACCAAGG TCGGCTCTCC GGCCTTCACG GTGGACGCTG GCTTCACGGG CGGCGGTGGC GAAGCTAAGA CAGCCTATCT GAACACTGGC ATCGTCCTCG GCACGAGCAC CCTGTTCGCG CAGAGCAGCG GCCACATGGG CGTCGTGCAA TCTACGGCCA TGACGGGCGG CGATCAGGTC GCCTTAGGTG ATGACAATTA CAACAGCGGC GTGGGCATCG GCCGGTATTC AACCCTAATC GGTCTCGCGA GCCCGAACGG CCTGACCTAT TCAGACCGCA CGACGCCGGA TGGGACCGGG CATCTGATCG CGAGCCGATC GGTTGCAGGC ACGATCACGA GTTCGCTCGG CGGCTCGGCA CGGGCGAGCA TTACGGATGC GAGCGCAGCC TTGGTTACGG ACGCGGGCAA CGCCGTGCAG ATGCTGCATG CCGCGGGGCA GATGTCCCGC ATCGCGGCGG CGCATTTCGG CTCGGGCTTG ACGCCGGCTG AGCAGCGCGA CCTCTACTCA ATCACGAAGT TCTGCCTGTT GGGCGTTTCT CGTGCGGCCT GA
|
Protein sequence | MLRRSFLSGV AASVIGGAAN AQLPPARLCP NFRFRSAPSI LPWNRTTFTS KRSVNIVAIG FNLYGRWGTA SWDISATNAR LAALKALGFD AVRIAIDPTT ALNGAQTHAQ WWAVAQYAID KALAEDLNVI ADLHVALDGS QSTYRADQIE AAYPNGLAWA AYVNLLQYFA AQLAGYNNTE VCAEIYNENM QDVGGDWPAM AKTLWNAFRV KNLNTTVLVG GSSYSSVDGL ADLLAANFDA NTGYVVHDYE PGVLSHQGVG VYQPVSRLHY PPIFSEKAAA LAQVLGNSSL TGQINNYFGS SQFDATTMND GWLAAKVAVV TAWRKANGVP ASRIFMTETG IHNDTDFRGA SRVARLGFIQ TKTRLHEAAG HSVGIWAWDG SYWALPSVNA VDADYQAALG LSGGIFYETE ASALFARITI QPSAMRKALI NATIKMLKDT GLWTKLDAFY MLAAADEQSA RLNWKSAMGS LTKVGSPAFT VDAGFTGGGG EAKTAYLNTG IVLGTSTLFA QSSGHMGVVQ STAMTGGDQV ALGDDNYNSG VGIGRYSTLI GLASPNGLTY SDRTTPDGTG HLIASRSVAG TITSSLGGSA RASITDASAA LVTDAGNAVQ MLHAAGQMSR IAAAHFGSGL TPAEQRDLYS ITKFCLLGVS RAA
|
| |