Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3914 |
Symbol | |
ID | 7114923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 4109920 |
End bp | 4111974 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643526644 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002422654 |
Protein GI | 218531838 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.62869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCT TGAGATCAGC TCCACCATTC CCACTGGGTT TCCTCAACGA CGTCGTCGCG GTCGAAAGCA TCGCGGCCGT GCCCACGATC CTCGATGTGG TCTGTCGCAC CACGGGCATG GGCTTCGCTG CCGTCGCCCG TGTCACCGAG GACCGCTGGG TCGCCTGCGC CGTCAAGGAC GACATCGCCT TCGGCCTCAA GCCCGGTGGC GAGCTGGATC TTGAGACGAC CATCTGCCAC GAGATCCGGC AGAGCGGGGT CCCGGTCATC ATCGACCACG TCGCCGATGA CCCGACCTTC TGCGAACATC ACACACCCGC CAAGTACGGC TTCCAGAGCT ACATCTCGAT GCCCATCGTG CTGCCGGACG GCACGTTCTT CGGCACGCTC TGCGCCATCG ATCCGAAACC CGCCAAGCTG AACACGCCCG CGGTCGTGGG CATGTTCAAG ATGTTCGCCG ACCTGATCGG CTTCCACCTC GATGCCAACC AAAATCTTGC ATCGCGCACG GCCGAGCGCG ATCTCTACGA GAACATCGTT CAGTCCCACG CAGAGCCGAT CTGCGTCTTC GACAAAGCGT ACCGGCTGAT CGCCTTCAAC AAGGCCCACA ACGACGAGTT CTTCCGGGTC AACGGCTTCT ACACGAAGAT CGGCGACGTC TTTCCCGACC TGTTCATTCC GGAGCAGGCC GCCGCGATGC GCGCCAATAT GGCCCGCGCG CTGGCGGGCG AGGCGTACAC GGTCGAAGCC GTTTTCGGCC GGGCCGAGTT CGGCCAGCCC TGCTGGGAGA TCACCTACAC ACCCCTGCGC GATGCAGCAG GAACGATATT CGGCGCGTTC CACCAAGCGC ACGACATCAG CGCGCGGCTC AGGGCCGAGG CTGAGCTTCG GGACGCGCAG GACGTGCTGC GGCAGTCGCA GAAGCTGGAG GTGATCGGCC AGCTCACCGG CGGCGTCGCG CACGATTTCA ACAACCTTCT CACGGTCATC AAGTCGTCGA CCGATCTCCT CAAGCGACCG GATCTCGCCG AGGACAGGCG CAGCCGCTAC ATCGAGGCGA TCTCCAACAC GGTGGATCGC GCCGCGAAGC TGACCGGCCA GCTCCTCGCC TTCGCACGGC GGCAGACACT CAAACCCAAG GTGTTCGCAG CCTGCGACAG CGTGCGCTCG CTCTCCGAAA TGCTGGGTAC GCTCACCGGT TCTCGCATCA CGGTCGTGAC CGAGCTGCCG GAGAACGCCT GCTTCGTGAA TGCTGACCCG AGCCAGTTCG ACACGGCGCT GGTGAACATG GCGGTGAATG CGCGCGACGC GATGGAGGGT GAGGGGCAGC TCACCATTCG CGTGGAGCCC GTCGAGCAGA TGCCATCTGT GCGCGCTCAC CCCGCGGTAC AGGGGCCGTT CGTGGCGGTG TCGATCAGCG ACACGGGCAG CGGCATCGCG AAGGACGTGG TCGAACGGAT CTTCGAGCCG TTCTTCACCA CCAAAGCAGT CGGGCAAGGG ACCGGCCTCG GGCTCAGCCA AGTCTTCGGC TTTGCCAAGC AGTCCCATGG CGAGGTCGTG GTGGAAAGCG AAGTCGGGCG GGGCACGACC TTCACGCTCT ACCTTCCTCG CGTGCTCGGC GAGATCCAAG CGCCGGAGCC AAGCGAGCCG ACGCCCGTGC CGAGCGGCCG CGGCACCTCT GTGCTCGTGG TCGAGGACAA TGTCGAAGTC GGCACCTTCG CCACGCAGAC CTTGGCGGAA CTCGGCTTCG GCACGGTCTG GGCGGCGAAT GCCGCGGAAG CCCTGGCGGA GTTGGCCAAG GACGCGGATC GCTTCGACGT GGTGTTCACG GACGTGATGA TGCCCGGCAT GAACGGCGTC GATCTCGCCC GCGAGATCCA GCGGCTTCAC CCCGACCTTC CTGTCGTTCT GACCTCCGGC TACAGCCACG TTCTGGCCCG GACCGGCACC AACGGGTTCG AGCTTCTGCA GAAACCCTAC TCGGTCGAAC AGCTCTCGCG CACCTTGCAG GCGGTGGCCA AGCCTGCTCG CCGCAAGCGC ATCGGTGACG TGTAG
|
Protein sequence | MTALRSAPPF PLGFLNDVVA VESIAAVPTI LDVVCRTTGM GFAAVARVTE DRWVACAVKD DIAFGLKPGG ELDLETTICH EIRQSGVPVI IDHVADDPTF CEHHTPAKYG FQSYISMPIV LPDGTFFGTL CAIDPKPAKL NTPAVVGMFK MFADLIGFHL DANQNLASRT AERDLYENIV QSHAEPICVF DKAYRLIAFN KAHNDEFFRV NGFYTKIGDV FPDLFIPEQA AAMRANMARA LAGEAYTVEA VFGRAEFGQP CWEITYTPLR DAAGTIFGAF HQAHDISARL RAEAELRDAQ DVLRQSQKLE VIGQLTGGVA HDFNNLLTVI KSSTDLLKRP DLAEDRRSRY IEAISNTVDR AAKLTGQLLA FARRQTLKPK VFAACDSVRS LSEMLGTLTG SRITVVTELP ENACFVNADP SQFDTALVNM AVNARDAMEG EGQLTIRVEP VEQMPSVRAH PAVQGPFVAV SISDTGSGIA KDVVERIFEP FFTTKAVGQG TGLGLSQVFG FAKQSHGEVV VESEVGRGTT FTLYLPRVLG EIQAPEPSEP TPVPSGRGTS VLVVEDNVEV GTFATQTLAE LGFGTVWAAN AAEALAELAK DADRFDVVFT DVMMPGMNGV DLAREIQRLH PDLPVVLTSG YSHVLARTGT NGFELLQKPY SVEQLSRTLQ AVAKPARRKR IGDV
|
| |