Gene Mchl_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3428 
Symbol 
ID7116075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3614031 
End bp3614906 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content74% 
IMG OID643526163 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002422176 
Protein GI218531360 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.751932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.619631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGTCC TCACCACCCG CGCTCCGGCC AAGATCAACC TGACCCTGCA CATCCTCGGC 
CGCCGGCCCG GCGACGGCTA CCATGCGCTG GAGAGCCTCG TGGCCTTCGC CGACGTGGCG
GACACGCTGG AACTGGTGCC GGGCCCTGAT CTGACGCTGG ACATCTCCGG CCCCACCGCC
GGGCCGGCTG GACCGCTCGA CGACAACCTC GTCCTGCGCG CCGCCCGCCA CCTCGCTGCG
GGCGTGGACG GCCTGAGGCT CGGCGCCTTT CGCCTGCACA AGCAACTGCC CGTGGCGGCG
GGGATCGGCG GCGGCTCGTC GGATGCGGCC GCTGCCCTGC GGCTGCTGGC CGAGCTGAAT
GGGCTCGCCC TTGATCACCC GGCGGTCATC GCGGCGGCGC GGGCGACCGG CGCCGACGTG
CCGGTCTGTC TCGATCCGCG GGCGCGGATG ATGCGCGGCG CGGGCGAGGA AATCGGGCCG
GTGCTCGGCC TCGCATCGCT GCCGGCGGTG CTGGTCAATC CCGGCGTGCC GGTCTCGACC
GCGCCGGTTT TCAAGGCGCT CGGCCTCGCG GTCGGTCAGC GGCTCGACGG GGCGGAGCTT
CCGGTCGTCG GGGCTAGCCT CAATGCGGAC GCCGTGCTCG CCGTCATCAC CCCCGCTCGC
AACGATCTTG AGGCGCCGGC CCTCACCGTC GCCCCGGTGA TCGGCGAAGC GCTGGCGCTG
CTGCGGGCTC AGGCCGGGTG CCGGCTCGCG CGGATGTCGG GCTCCGGGGC CACCGTGTTC
GCAATTTTTT CCGATGACGG GGCGGCGGAG ACGGCGGCCG CAGCGATCCG CACCGCCGAG
CCGGGCTGGT GGGTCGAGCC GACGCGGCTC GCCTGA
 
Protein sequence
MSVLTTRAPA KINLTLHILG RRPGDGYHAL ESLVAFADVA DTLELVPGPD LTLDISGPTA 
GPAGPLDDNL VLRAARHLAA GVDGLRLGAF RLHKQLPVAA GIGGGSSDAA AALRLLAELN
GLALDHPAVI AAARATGADV PVCLDPRARM MRGAGEEIGP VLGLASLPAV LVNPGVPVST
APVFKALGLA VGQRLDGAEL PVVGASLNAD AVLAVITPAR NDLEAPALTV APVIGEALAL
LRAQAGCRLA RMSGSGATVF AIFSDDGAAE TAAAAIRTAE PGWWVEPTRL A