| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3413 |
|---|
| Symbol | |
|---|
| ID | 7116060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 3597857 |
|---|
| End bp | 3599674 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643526148 |
|---|
| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| Protein accession | YP_002422161 |
|---|
| Protein GI | 218531345 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCACCG AGCGGACGAA CCCGGCAGCG CCGGATTTCG AGACCATCGC GCGCAACGCG
AATCAGCTCG CGGAGGTGTT CCGGCAATCG GCCGCCGCCT CGCTGAAGCC GTTCGAGCCG
GCGGGCCAGG GAGCCCTGCT CCCGGGCGCG AACCTCCAGG GCGCCAGCGA GATCGACGAG
ATGACCCGCA CCCTCACGCG GGTCGCGGAG ACATGGCTGA AGGATCCCGA GAAGGCGCTC
CAGGCCCAGA CCAAGCTCGG CCAGTCCTTC GCCGCGCTCT GGGCCTCGAC CCTGACCCGG
ATGCAGGGGG CCGTCACCGA GCCGGTCGTC CAGCCCCCAC CGACGGACAA GCGCTTCGCC
CATGCCGATT GGAGCGCGAA CCCGGTCTTC GACCTGATCA AGCAGAGCTA CCTGCTCCTT
GGCCGCTGGG CCGAGGAGAT GGTCGAGACG GCCGAGGGCA TCGATGAGCA CACCCGCCAC
AAGGCGGAGT TCTACCTGCG CCAGCTCCTC TCGGCCTACT CGCCCTCGAA CTTCGTGATG
ACGAACCCCG AGCTCCTGCG CCAGACGCTG GAGGAGGGGG GCGCCAACCT GATGCGCGGC
ATGAAGATGC TGCAGGAGGA TCTGGAAGCC GGCGGCGGTC AGCTCCGGGT GCGACAGACG
GACCTGTCCG CCTTCACCTT CGGCAAGGAC GTGGCGGTGA CGCCCGGCGA GGTCATCTTC
CGCAACGATC TGATGGAGTT GATCCAGTAC GCGCCCACGA CCGAGACGGT ACTGAAGCGT
CCGCTGCTGA TCGTGCCGCC CTGGATCAAC AAGTTCTACA TCCTCGATCT CAACCCGCAG
AAGAGCCTCA TCGGCTGGAT GGTGTCTCAA GGGATCACGG TGTTCGTGAT CTCCTGGGTG
AACCCGGACG AGCGCCACCG CGACAAGGAC TTCGAGTCCT ACATGCGGGA AGGCATCGAG
ACCGCCATCG ACATGATCGG CGTGGCGACC GGCGAGACCG ATGTCGCGGC GGCGGGCTAC
TGCGTCGGCG GCACGCTGCT CGCCGTCACG CTGGCCTACC AGGCGGCGAC CGGCAACCGC
CGCATCAAGA GCGCGACCTT CCTCACCACG CAGGTCGATT TCACTTATGC GGGCGATCTC
AAGGTCTTCG CCGACGAGGG GCAGATCAAG GCGATCGAGG AGCGGATGGC CGAGCACGGC
TACCTGGAGG GCGCGCGCAT GGCCAACGCC TTCAACATGC TCAGGCCCAA CGACCTGATC
TGGTCCTACG TCGTCAACAA CTACGTGCGC GGCAAGGCGC CGGCCGCCTT CGACCTGCTC
TACTGGAACG CGGACGCCAC GCGGATGCCC GCGGCCAACC ACTCGTTCTA CCTGCGCAAC
TGCTACCTCA ACAACACGCT CGCCAAGGGG CAGATGGTGC TCGGCAACGT GCGCCTCGAC
CTCAAGAAGG TGAAGGTGCC GGTCTTCAAC CTCGCCACCC GCGAGGACCA CATCGCCCCG
GCGCTCTCGG TCTTCGAAGG GTCGGCCAAG TTCGGCGGCA AGGTCGATTA CGTGCTGGCG
GGCTCGGGCC ACATCGCCGG CGTCGTCGCC CCGCCGGGCC CCAAGGCTAA ATACGGCTTT
CGCACCGGCG GCCCGGCCCG AGGCCGGTTC GAGGATTGGG TCGCGGCGGC GACGGAGCAT
CAAGGCTCGT GGTGGCCCTA CTGGTTCAAG TGGCTCGAGG AGCAGGCGCC CGAGCGCGTG
CCCGCCCGCA TTCCTGGAAC GGGAGCGCTG CCTTCCCTGG CGCCGGCACC GGGCACCTAT
GTCCGCATGA AGGCGTGA
|
|---|
| Protein sequence | MGTERTNPAA PDFETIARNA NQLAEVFRQS AAASLKPFEP AGQGALLPGA NLQGASEIDE
MTRTLTRVAE TWLKDPEKAL QAQTKLGQSF AALWASTLTR MQGAVTEPVV QPPPTDKRFA
HADWSANPVF DLIKQSYLLL GRWAEEMVET AEGIDEHTRH KAEFYLRQLL SAYSPSNFVM
TNPELLRQTL EEGGANLMRG MKMLQEDLEA GGGQLRVRQT DLSAFTFGKD VAVTPGEVIF
RNDLMELIQY APTTETVLKR PLLIVPPWIN KFYILDLNPQ KSLIGWMVSQ GITVFVISWV
NPDERHRDKD FESYMREGIE TAIDMIGVAT GETDVAAAGY CVGGTLLAVT LAYQAATGNR
RIKSATFLTT QVDFTYAGDL KVFADEGQIK AIEERMAEHG YLEGARMANA FNMLRPNDLI
WSYVVNNYVR GKAPAAFDLL YWNADATRMP AANHSFYLRN CYLNNTLAKG QMVLGNVRLD
LKKVKVPVFN LATREDHIAP ALSVFEGSAK FGGKVDYVLA GSGHIAGVVA PPGPKAKYGF
RTGGPARGRF EDWVAAATEH QGSWWPYWFK WLEEQAPERV PARIPGTGAL PSLAPAPGTY
VRMKA
|
|---|
| |