Gene Mchl_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2956 
Symbol 
ID7118151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3118969 
End bp3119907 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content71% 
IMG OID643525706 
Productchlorophyll synthesis pathway, BchC 
Protein accessionYP_002421723 
Protein GI218530907 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.106767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGT TGGCCGTCGT CCTTGAACGA CCGGAGCACT TGGCCCTCAA CCGTCTCGCG 
CTCACCCCCG CGACCGAGGG CGATGCGACC GTTGCCGTCT CCTGGAGCGG CATCAGCACG
GGGACCGAGC GCCTGCTCTG GTCCGGCCGG ATGCCGTCCT TTCCCGGCAT GGGGTATCCG
CTGGTGCCCG GCTACGAGTC GGTCGGCACG GTGGTCGAGA CCGAGGCCCA TAGCGGCCTG
CGCGTCGGAC AAACCGTGTT CGTGCCCGGC GCCCGCTGCT TCGGCGCGGT CAACGGGTTG
TTCGGCGGCG CGGCCTCGCA CCTGATCGCT CCGGCCTCGC GCCTCGTCCC GGTCGATGCC
GCACTCGGCG ACCGCGCCTG CCTCATCGCC CTGGCGGCGA CCGCCTACCA CGCCCTGTCC
GGCATCGTGC CCGGCAAGCG GACCCTGATC GTCGGCCACG GCGTGCTCGG CCGGCTGCTC
GCGCGGCTGA CGGTGCTAGC CGGCGGCGAG CCCGTGGTGT GGGAGCGCGA GACGCTGCGG
GCTGAGGGTA CGTTCGGTTA TTCCGTTCTC GCCCCCGACG ACGATCCGGC GCGTGATTAC
TCCACCATCA CCGATGTCAG CGGCGATTCG AGCCTGCTCG ACACGCTGAT CGGCCGCCTC
GCGCCCGGCG GCGAGATCGT GCTGGCCGGC TTCTACGAAG CGCCGCTCGT CTTCGCCTTC
CCACCCGCCT TCCTGCGTGA GGCCCGCATC CGGGTCTCGG CGGAGTGGCG CCCGAGCGAT
CTCGCGGCGG TCCGGGCCCT GATCGAGTCC GGAAGCCTGT CGCTCGACGG ACTCATCACC
CACCGGGTGC CCGCCACGGA AGCGGGGGAG GCCTACCGCA AAGCTTTCGC CGATCCGGCC
TGCCTGAAGA TGATCCTCGA TTGGAGGGCC TGCTCATGA
 
Protein sequence
MEALAVVLER PEHLALNRLA LTPATEGDAT VAVSWSGIST GTERLLWSGR MPSFPGMGYP 
LVPGYESVGT VVETEAHSGL RVGQTVFVPG ARCFGAVNGL FGGAASHLIA PASRLVPVDA
ALGDRACLIA LAATAYHALS GIVPGKRTLI VGHGVLGRLL ARLTVLAGGE PVVWERETLR
AEGTFGYSVL APDDDPARDY STITDVSGDS SLLDTLIGRL APGGEIVLAG FYEAPLVFAF
PPAFLREARI RVSAEWRPSD LAAVRALIES GSLSLDGLIT HRVPATEAGE AYRKAFADPA
CLKMILDWRA CS