Gene Mchl_2754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2754 
Symbol 
ID7113944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2899624 
End bp2901027 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content67% 
IMG OID643525502 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_002421521 
Protein GI218530705 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID[TIGR00591] photolyase PhrII 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.853539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCC AACCGGCCCG CATCCGGGTG CTGAACGACG TGAAGCCGCG CGAAGGCGCC 
GGTTACATCC TGTACCTGAT GCAGCAAGCC ATGCGCGTCC CGTTCAATCC GGCGCTGGAA
CTCGCGATTG AGGAAGCCAA CCGCCTCAAG CTTCCGCTCC TCGTCTGCTT CGGCCTGCTC
GACGGCGCCA ACGGCTTCCC CGAGGCCAAT GCCCGGCACT ACGCCTTCCT GCTGCAGGGG
CTCGCCGACG CGGCCGCTGC CCTGGAAAAG CGCGGCATCG CCTTTCTCCT GCGCCGGGCA
ACGCCGGCTG AGGTCGCCAT CGATCTCTCG GCAGACGCCG CGCTGCTGGT GCTCGATCGC
GGCTACCTCG CGATCCAGAA ACGCTGGTAC GGCGAGATCG AACGGGAGGC GCAATGCCGG
ATCGTTCAGG TCGAGGGCGA TGTGGTGGTG CCGCTCGAGA CTGTCTCGAC CAAGCACGAA
TACGCCGCGC GCACCCTGCG CCCGAAGCTC CGGAAGCTCT GGGACGATTA TCTCGAACCC
GTAGAGCCGC TCACGGTCGA TCACCCGGCC GAGGGGCTGA TCCAGCGGCT AAAGCTGAAG
GATGGGCTCG ACGTCTCGGA CCCGGAAAAG CTTCTCGCGA AGCTGACGCT CGACACCACG
GTCGGCCCGG TGAAGCGCTT CCGCGGCGGC TACACCGAGG CTGCCGGGCA TCTGAAGCGC
TTCCTGGAGC ACGCCTTCGC TGGCTACGGG GCCGGGCGCA ACAAGCCGGA GGCCGGGGCG
GCTTCGCATA TGAGCCCCTA CCTGCATTTC GGGCACATCT CGCCGGTCGA GATCGCGCTG
GCGATCCGCG CCGCGAAGGA CGCCGACGAT GACGACCGCT CGGCTTATCT CGAGGAGCTG
ATCGTCCGGC GCGAACTGGC GATGAACCAC GTCTTCCACA CGCAGGGCTA CGACGACTAC
GCCCGCGCCG TGCCCGACTG GGCCCGCAAG ACGCTGGCCG AGCACGCCGA CGACCCGCGC
CCGAAACTCT ATTCCGAGGA GGAGTTGGCG GAGGGGAAGA CCCACGACCA TTACTGGAAC
GTCGCCATGC GCGAGATGCG CGAGACCGGT TACATGCACA ACCAGCTCCG CATGTACTGG
GGCAAGAAGA TCCTCGAATG GTCGCCATCG CCGGAGGAGG CGTTCGCCCG GACGCTGCGG
CTCAACAACC GCTACTTCCT CGACGGGCGC GACGCGAACT CCTTCACCAA CGTCGCCTGG
ATCTTCGGCC TGCACGACCG CCCGTGGCAG ACCCGCCAGA TTTTTGGGAG CGTGCGCTAT
CAGAGCGAGA ACTCGCTCCG GAAGTTCGAC GCGAAGGGCT ACGAGCGGGC GGTGACGCGG
CTGTGCGAGG CGGAAGACGG CTGA
 
Protein sequence
MAIQPARIRV LNDVKPREGA GYILYLMQQA MRVPFNPALE LAIEEANRLK LPLLVCFGLL 
DGANGFPEAN ARHYAFLLQG LADAAAALEK RGIAFLLRRA TPAEVAIDLS ADAALLVLDR
GYLAIQKRWY GEIEREAQCR IVQVEGDVVV PLETVSTKHE YAARTLRPKL RKLWDDYLEP
VEPLTVDHPA EGLIQRLKLK DGLDVSDPEK LLAKLTLDTT VGPVKRFRGG YTEAAGHLKR
FLEHAFAGYG AGRNKPEAGA ASHMSPYLHF GHISPVEIAL AIRAAKDADD DDRSAYLEEL
IVRRELAMNH VFHTQGYDDY ARAVPDWARK TLAEHADDPR PKLYSEEELA EGKTHDHYWN
VAMREMRETG YMHNQLRMYW GKKILEWSPS PEEAFARTLR LNNRYFLDGR DANSFTNVAW
IFGLHDRPWQ TRQIFGSVRY QSENSLRKFD AKGYERAVTR LCEAEDG