Gene Mchl_2742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2742 
Symbol 
ID7113932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2880799 
End bp2882187 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content71% 
IMG OID643525490 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002421509 
Protein GI218530693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.878273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.333603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA GTTCGCCGAT ACGCAGGGAG ACCGCCCGGG AGTACCGGAC CGCGGACCCG 
GTGACGACCG CACCGGTCCG CCGGCGCCGT AAGTTCGGCC GCTGGATGCT CGCGCTGCTG
ATCCTCGGCG GGGCCGGCGC CGTCGCCCAC CGCACCTACG ACGCCCGGCA GAAGCCGGCC
GGGGAGACCG CACAGGCGCC GGGCGGCGGC CGTCCCGGTC ACGGCGGACG GCCGGCCGAC
ATGAAGCAGG CGGTCGGCGT CGCGCCGATC GTGACCGGCG ACATGCCGGT CGTGCTCCAG
GGCCTCGGCA CGGTGACGCC GCTCGCCACC GTCTCGATCC GCTCGCAGAT CAGCGGCTAC
CTCACCAAGA TCGGCTTTCG CGAGGGCCAG ATGGTGAAGG AGGGCGACTT CCTCGCCCAG
GTCGATCCGC GGCCCTACGA AGCGTTGCTC GCGCAGTATC AGGGCCAGCT CGCCCGCGAT
CAGGCGCTGC TGCAGAACTC GAAGCTCGAT CTCCAGCGCT ACCAGACCCT GAACCGCCAG
GATTCGATCT CGAAGCAGAA CGTCGACACC CAGGCCGCCC TGGTGAAGCA GAACGAGGGC
ACGGTCGCCG CCGACCAAGC GCTCGTCGAT CAGCAGAAGC TCAATCTCAA CTATGCCCGG
ATCGTCTCGC CGGTGGAGGG CCGGGTCGGC CTCAGGCAGG TCGATCTCGG CAACTACATC
ACCGCCGGCT CGACCAACAT CGTCGTCGTC ACGCAGTTGC GTCCGATCTC GGTGGTGTTC
GTTCTGCCGG AGGACGACGT GGCGCGGGTG ATGCGCCGGG TGCGCGCAGG CGCGAAGCTG
ACGGTGCGCG CCTACGACAG AAGCGACCAG CACGAGATCG CGGTCGGCCG CCTCGACACG
GTGGACAACC AGATCGACAC CACGACCGGC ACGGTGAAGC TGCGGGCGAT GTTCGAGAAC
GAGGACGAGA GCCTGTTCCC GAACCAGTTC GTCAACGCGC GCCTCACCGT CGAGACGATC
CAGAACGCGG CCCTGGTGCC GAACGCCGCG ATCCTGCGCG GCACGCCGGG CACCTACGTC
TACCTGATGG ACGGCGACGA GAAGGTCACC GTGCGCCCGA TCAAGACCGG CGAGACCGAT
GGGGTGAACA CGGTGGTTCT GTCGGGGCTT GCGGCGGGCG ACCGCGTCGT CACCGATGGC
ACCGACCGGC TGCGCGAGGG CGCGCCGGTG CGCGTCGTCG CCAACGCCCC CGGACCCCAG
GCCGGCGGCC CGGCGGCGGG CGCCCCCGGC GCGACGCTTC CGACGACGCC CGCGGCCGGC
GCGCCGGCCG ATACCGGTTC GACCCAGGGC GGTCAGGAGC GCCGGGGACG CCGGCGCCCG
GCCCCGTAA
 
Protein sequence
MNESSPIRRE TAREYRTADP VTTAPVRRRR KFGRWMLALL ILGGAGAVAH RTYDARQKPA 
GETAQAPGGG RPGHGGRPAD MKQAVGVAPI VTGDMPVVLQ GLGTVTPLAT VSIRSQISGY
LTKIGFREGQ MVKEGDFLAQ VDPRPYEALL AQYQGQLARD QALLQNSKLD LQRYQTLNRQ
DSISKQNVDT QAALVKQNEG TVAADQALVD QQKLNLNYAR IVSPVEGRVG LRQVDLGNYI
TAGSTNIVVV TQLRPISVVF VLPEDDVARV MRRVRAGAKL TVRAYDRSDQ HEIAVGRLDT
VDNQIDTTTG TVKLRAMFEN EDESLFPNQF VNARLTVETI QNAALVPNAA ILRGTPGTYV
YLMDGDEKVT VRPIKTGETD GVNTVVLSGL AAGDRVVTDG TDRLREGAPV RVVANAPGPQ
AGGPAAGAPG ATLPTTPAAG APADTGSTQG GQERRGRRRP AP