Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2635 |
Symbol | |
ID | 7117384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 2768589 |
End bp | 2770445 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643525381 |
Product | lipid A ABC exporter family, fused ATPase and inner membrane subunits |
Protein accession | YP_002421403 |
Protein GI | 218530587 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.239281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGCA AGCGTGATGC GTCGTCCGGC GCAGGAGACG ATCCGCAGGC GGCTCTCCGG GGGCGGGCGC CGCTCGGAGC TCTCAAGCCG CTGATTCCCT TCGCCAGCCG CTACCGGGGC CGCATCCTCG CGGCGCTGAT TTCGTTGATC GCGGCGTCGG GCGCGACGCT CGTCGTGCCG ATCGCGATTC GCCGGGTGAT CGACCACGGC TTCTCGCCGG AGGGGCAGGC CCTCATCAAT TCCTACTTCC TGGCGCTGCT CGTGGTGGTG GCGGTGCTCG CGGTGTCGAG TGCGGGCCGC TACTACTCGG TGGTGACGCT GGGCGAGCGC GTCGTCGCGG ATCTGCGCTC GGCCGTGTTC GCGCGCCTGA CGAGCCTCGA CCCGACCTTC TTCGACAAGT CGCAATCCGG CGAGATCGTC TCGCGGCTCA CGGCGGATGC CACGCAGGTC AAGGCGGTGT TCGGGGTCTC GATCTCGATC CTGCTGCGCA ACCTGTTCCT GTTCGTCGGC GCCGTGGTGA TGATGGTCTG GACGAGCCCC GGCCTGTCGA TCCTGGTGCT CGCCGCGATT CCGCTCATCG TGTTTCCGCT GATCCTGTCG GGCCGCGGTG TGCGGCGGCG CTCGCGCGCG GCGCAGGACC GGCTCGCCGA CGCCTCGGCC TACGCGGCGG AAGCGGTCGG GGCGGTCCGT ACCATGCAGG CTTTCGGCAT GAGCCGCGCC ACCGCCGAGC GCTTCGCGCA AGCTTCCGAG AACGCCTACC GGGCGGCGCG GGTCTCGATC ACGGCCCGCG CCCTGCTCAC CGGCGTGGCG ATCTTCCTGA TCTCCGCCTC GGTCGTCGGC GTGATGTGGT ACGGCGCGAA GGGCGTGCTC GCGGGCACCA CCAGCGCCGG CCAGCTCTCG CAATTCGTGC TCTACGCCGT GTTCGGCGCC AGCGCCCTTG GGCAGCTCTC CGAGGTCTAC GGCGAACTCG CCCAGGCCGC GGGCGCCGCC GAGCGACTCG GCGAGATCCT GGCCGCCGAG CCGGCGATCA AGTCCCCCGA GCACCCGGTC GCGCTGCCGA GCCCGGCCCG CGGCGCAGTC GCGTTCGAGG CGGTGCGCTT CCGCTACCCG ACCCGGCCCG AACACGCGGC GCTGGACGGC ATCTCCTTCA CGGCGGCGCC CGGCGAGCGG ATCGCCCTCG TCGGCCCGTC GGGGGCCGGC AAGACCACGG TGCTGCAATT GCTGCTGCGC TTCTACGACC CCGACGAGGG GCGCGTGACG ATCGACGGCG TGCCGCTGCC GCAGGCCGAT CTCGACGCCC TGCGGGCCCG CCTCTCCCTG GTGCCGCAGG ACCCGGTGGT GTTCTCCGGC ACAGTTCTGG AGAACATCCG CTACGGGCGC CCCGGCGCCA GCGAGGCGGA GGTCGAGGAG GCGGCGCGCC TCGCCAACGC CGATGGCTTC GTCCGTGCCC TGCCGCAGGG CTACGCGACA ATGCTCGGCG AGCGCGGCAC CACGCTCTCG GGCGGGCAGC GCCAGCGTAT CGCCATCGCC CGCGCCATCC TCAAGGATGC GCCGGTCCTT CTCCTCGACG AGGCGACCTC GGCGCTCGAT GCCGAGAGTG AGCGCGCGGT GCAGAACGCC CTCGACCGTC TGATGCAGGG CCGCACCACG CTGGTGATCG CCCACCGGCT TGCGACCATC CGCGCAGCCG ACCGCATCCT CGTCTTCGAC GGCGGAAAGA TCGTCGAGGA GGGCACGCAC GAAAGCCTGC TCGCCCGCGG CGCCCTCTAC GCGCAGCTCG CGAGCCTGCA ATTCGCCGAC AGCTTCGATG ACAGCGCCCG GGCGCGCGAC CCGCGCCCGA AACACGCCGC GGAATAG
|
Protein sequence | MARKRDASSG AGDDPQAALR GRAPLGALKP LIPFASRYRG RILAALISLI AASGATLVVP IAIRRVIDHG FSPEGQALIN SYFLALLVVV AVLAVSSAGR YYSVVTLGER VVADLRSAVF ARLTSLDPTF FDKSQSGEIV SRLTADATQV KAVFGVSISI LLRNLFLFVG AVVMMVWTSP GLSILVLAAI PLIVFPLILS GRGVRRRSRA AQDRLADASA YAAEAVGAVR TMQAFGMSRA TAERFAQASE NAYRAARVSI TARALLTGVA IFLISASVVG VMWYGAKGVL AGTTSAGQLS QFVLYAVFGA SALGQLSEVY GELAQAAGAA ERLGEILAAE PAIKSPEHPV ALPSPARGAV AFEAVRFRYP TRPEHAALDG ISFTAAPGER IALVGPSGAG KTTVLQLLLR FYDPDEGRVT IDGVPLPQAD LDALRARLSL VPQDPVVFSG TVLENIRYGR PGASEAEVEE AARLANADGF VRALPQGYAT MLGERGTTLS GGQRQRIAIA RAILKDAPVL LLDEATSALD AESERAVQNA LDRLMQGRTT LVIAHRLATI RAADRILVFD GGKIVEEGTH ESLLARGALY AQLASLQFAD SFDDSARARD PRPKHAAE
|
| |