Gene Mchl_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2580 
Symbol 
ID7117327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2712526 
End bp2713737 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID643525327 
Productradical SAM domain-containing protein 
Protein accessionYP_002421349 
Protein GI218530533 
COG category[R] General function prediction only 
COG ID[COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.20747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.542097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA AGCTCGCGCG CAAGCTGCGC ATCCTCGCGG ATGCCGCCAA ATACGACGCC 
TCCTGCGCGT CCTCCGGTGC GCCCAAGCGC AAGGCCGGCG CGGACGGGCT CGGCTCGACC
ACGGGCGCCG GCATCTGCCA CGCCTACACG CCGGACGGGC GCTGCGTTTC GCTGCTCAAG
ATCCTGCTGA CCAATTATTG CCTGTTCGAC TGCGCCTATT GCGTGAACCG GCGCTCCTCG
AACGTCGCCC GCGCGCGCTT CTCGGTCGAG GAGGTCGTGA CGCTGACGAT CGAGTTCTAC
AAGCGCAACT ACATCGAGGG GCTGTTCCTC TCCTCGGGCA TCATCCGCTC GCCCGACTAC
ACGATGGAGA TGCTGACCCG CGTCGCCAAG AAGCTCCGGC GCGAGCACGG CTTTCGCGGC
TACATCCACC TGAAGTCGAT TCCCGAGGCG AGCCCCTGGC TGATCGAGGA GGCGGGGCTC
TACGCCGACC GGCTCTCGAT CAATCTCGAA CTGCCGACGG AGGCCAGCCT CAACCGCCTC
GCGCCGGAGA AGGACGGCGC GGCGATCGAG AGCGCGATGG GCCAGATCGG CGAGCGCATC
GTCCAGGCCA AGGAGGAGCG CCGCCGCTTC TCGCCGGCCG GGCAATCGAC GCAGGTGATC
GTCGGGGCCG ACGCCACCAC CGACGAGGCG ATGATCCGCA AATCCGCTTT GCTCTACGGC
ACCTACGGGC TCAAGCGCGT CTACTACTCG GCCTTCAGCC CGATCCCCGA CGCCTCCGCG
GCCCTGCCGC CGCAGGCGCC GCCGCTGCGA CGCGAGCACC GGCTGTATCA GGCCGATTGG
CTGATCCGGT ATTACGAGTT CTCCCCCGAC GACGTGGCCG GGGCCTCCGA GGACGGCATG
CTCGCCCTCG ACATCGACCC CAAGCTCGCC TGGGCGCTGA AGAACCGCCA CTGTTTTCCC
GTCGATGTGA ACCGCGCCGA CCGCGAGATG CTGCTGCGGG TGCCGGGGCT CGGGGCGCGC
GCGGTCGATG CCATCATCAA GGCGCGCCGC CATGGCCGCC TGCGCCTCGA CGACGTGGCC
CGGCTGAGTT CGGGCCTGAA GCGGGCGCGG CCCTTCCTCA TCGCCGAGGA CTTCCGGCCG
ACGACGCTGA CCGACCGGCT CGATCTGCGG GCCAAGCTCG CGGAGCCGGC CGAGCAGTTG
AGTCTGTTCT GA
 
Protein sequence
MNEKLARKLR ILADAAKYDA SCASSGAPKR KAGADGLGST TGAGICHAYT PDGRCVSLLK 
ILLTNYCLFD CAYCVNRRSS NVARARFSVE EVVTLTIEFY KRNYIEGLFL SSGIIRSPDY
TMEMLTRVAK KLRREHGFRG YIHLKSIPEA SPWLIEEAGL YADRLSINLE LPTEASLNRL
APEKDGAAIE SAMGQIGERI VQAKEERRRF SPAGQSTQVI VGADATTDEA MIRKSALLYG
TYGLKRVYYS AFSPIPDASA ALPPQAPPLR REHRLYQADW LIRYYEFSPD DVAGASEDGM
LALDIDPKLA WALKNRHCFP VDVNRADREM LLRVPGLGAR AVDAIIKARR HGRLRLDDVA
RLSSGLKRAR PFLIAEDFRP TTLTDRLDLR AKLAEPAEQL SLF