| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2393 |
|---|
| Symbol | |
|---|
| ID | 7113748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 2533586 |
|---|
| End bp | 2534320 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643525141 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002421165 |
|---|
| Protein GI | 218530349 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.396021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA GCGGCCCCCA CATCGCCGTT GTGGACGACG AGGCCGATGC CCGCGCCATG
GTCGGCGACT ACCTGCGCCT GCACGGCTTC GACGTGGCCC TGTGCGAGGG CGGGCGGGCG
CTGCGGGCGC ATCTCCAGAT CCGCACGCCG GACCTGATCG TGCTCGATCT CAACATGCCC
GAGGAGGACG GCCTCTCCAT CGTGCGGGAT CTGAAGGCGC GAAGCCCGAT TCCGATCATC
ATGCTGACGG CGACGGCGAG TGCGATCGAC CGGGTGGTGG GGCTCGAACT CGGCGCGGAC
GATTACCTGC CCAAGCCCTG CGAATTGCGC GAACTCGTCG CCCGGGTGCG CTCGGTGCTG
CGGCGGGCCC AGGTCGCGCC GGCATCCCCG CAGGCGGCGG CGCCCGAAAC CGCGGCGTCG
GCACGAACGG TTCGGTTCGG CACGAAGTGG CTCGAACTCG ACGCCCTGCG CCTGCGCGAC
GATGCGGGCG TGGAGCAACC GCTCACCCGC TCGGAATTCG ATCTCCTCAA GGCCTTCGCC
GACCATCCGA AGCGGGCCCT GTCGCGCGAG CGCCTGCTCG ACCTCGCCGA CGCCCGCGAT
CCGGACGCGT TCGACCGGGC GATCGACGTG CGAATCAACC GCATCCGCAA GAAGGTGGAG
CCGGACCCGG CCAACCCGCG CTACATCCGC ACCGTACGCG GCCTCGGCTA CATCTTCCGC
CCCGAAGGCG ACTGA
|
|---|
| Protein sequence | MTASGPHIAV VDDEADARAM VGDYLRLHGF DVALCEGGRA LRAHLQIRTP DLIVLDLNMP
EEDGLSIVRD LKARSPIPII MLTATASAID RVVGLELGAD DYLPKPCELR ELVARVRSVL
RRAQVAPASP QAAAPETAAS ARTVRFGTKW LELDALRLRD DAGVEQPLTR SEFDLLKAFA
DHPKRALSRE RLLDLADARD PDAFDRAIDV RINRIRKKVE PDPANPRYIR TVRGLGYIFR
PEGD
|
|---|
| |