Gene Mchl_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2378 
Symbol 
ID7116956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2516823 
End bp2518982 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content70% 
IMG OID643525127 
ProductTonB-dependent receptor 
Protein accessionYP_002421151 
Protein GI218530335 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGAA AGCGCTATGG GCTTGGCCCG TGGTTCGGAT CGTTCGCCGG GATCGGCATC 
GCCGGCCTCG TCGTGTCGCC GCTCCAGGCC GAAGAGGTCG CCCTCGACGA GATCAGCGTC
GTCTCGGACA AGCCGGCACG AAGCGCGGGT CCGGGTGCGG CGGGGCCGGC TCCGAAGCCG
GCCGACCCGG TCGGCGTCCT GCCGGTGGTG ACCGACCGGT TCTCGACGGT CACCGTCGTC
TCCGGGGCCG AACTCGCCCG CTCGCAACCG ACCTCGCTCG GCGAGGCGCT GTTCGACAAG
CCGGGCCTCT CCGCGACCAC CTTCGCGCCG GGCTCGGCCT CGCGGCCGAT CATCCGCGGC
CTCGACAACC ACCGTGTCCG CATCCTCGAG AACGGCACCG GTGTGCAGGA CATGTCGGAT
CTCGGCGAGG ACCACGCCGT CCCGATCAAC CCGCTGATCA ACGACCGCAT CGAGGTGATT
CGCGGGCCCG CAGGCCTGCG CTACGGCTCG CAGGCTGTCG GCGGCGTGGT CTCGGTCGAG
AACAACCGCA TCCCGACCAG CATTCCGCCC GGCGGCGTCG CGGGACGGGT GACGACCGGC
TACTCGGCCG TCGACAATGG TCGTAACGCC GCCGCCACGG TCGATGCCGG CAGCGGCAAC
GTCGCCGTCC ATGCCGATGC GTTCCGGAGC GCGGCGGACG ACTACAACAC GCCGCTCGGC
ATCCAGCGCA ATTCCTTCAA CGAATCGCAG GGCGGCGCCT TCGGCACCTC CTACCTGTTC
GACCGCGGCT TCGTCGGGCT GTCCTTCAGC CACTTCGATT CGGTCTACGG CATCCCCGGC
ATCAGCTCCG CGGCGCAGCG CACTCGCCTC GATCCGGTGC AGGACAAGCT CCAGGCCCGG
GGCGAGTACC GGCCGCTGGA CGGGCCGTTC GCCGCGATCC GGTTCTGGGC GGGCGGCTCG
AACTACCGTC ACAACGAGTT CGGCACCGAC GCCAACGGCG TCCAGGGGAT CGAGGCGGTG
TTCAAGAACC GCGCGGCGGA AGGGCGGATC GAATTCGACC ACGTGCCGGT CGAGACCGCT
TTCGGCACCT TCAGCGGCCA GCTCGGATTC CAGGCTGACC GGCGCAAGCT CCGCATCTCG
GGGGCGGAAG GGGGCCTGTT GCGCCCGACC GACACGCGGG TGCAGGCCGC CTACCTGTTC
GAGGAACTGG CGCTCGGCGG CGGCCTGCGA TTCCAGGCGG CGGGCCGCAT CGAGGGCAAC
CGCGTCGCCG GCACCCAGGC GCTGTTCCCC TCGAACTTCC TGCCCGACGG CCCCGGCGAC
GAGCCGGTGG AATCGCGGCG TATCCGCCGC TTCGCCCCGA AAAGCGCGAG CCTCAGCGCG
CTCCAGGACC TGCCCCATGG ATTCGTGGGG AGCCTGACCG GCTCCTATGT CGAGCGCGCC
CCGACCTCGC CCGAACTGTT CTCACGCGGC CCGCACGAGG CCTCCGCGAC CTTCGAGATC
GGCGATCCCA ACCTCAAGCC GGAGCGGGCC CGCACCGTCG AAGTCGCGAT CCGGCGGGCG
GAGGGGCCGT TCCGCCTCGA CGCGACCGGC TACGTCACGC GCTATACCGG CTTCGTCTAC
AAGCGCCTGA CCGGCTTCAC CTGCGGCGAC ACCTTCGACA GTTGCGGCAT CGGCGGCGGG
GATCTGCGGC AGGTCGCCTA TTCGCAGGCC GGCGCCACCT TCGCCGGCGC CGAGATCGCG
AGCCAGATCG ACCTCGTGCC GGTCGGCGAT GGGTTTGCCG GCATCAGCGC CCAGTACGAT
TTCGTGCGCG CCCAGTTCGA CGACGGCCGC TTCGTGCCGC GCATCCCGCC CCACCGCGTC
GGCGGCGGCG TCTTCCTGCG GGCCGACGGC TGGTTCGCTC AACTCAGCCT GCTGCACGCC
TTCGCTCAAA CGCAGACCGG CACGCTGGAA ACGCCGACGC CGGGCTACAA CGACCTCAAG
GCGGAGATCG CCTACAGCCG CCCGCTCGAT CCGGCGATCC ATGGTCTCAG CGAGGTGACG
CTCGGCCTGC GCGGCACGAA CCTGCTCGAC GATGTGATCC GCAATGCTGC CTCCTTCCGC
AAGGACGAGG TCGTGCTGCC GGGCCGCAAT GTGCGGCTCT TTCTCACGGC ACGGTTCTGA
 
Protein sequence
MSRKRYGLGP WFGSFAGIGI AGLVVSPLQA EEVALDEISV VSDKPARSAG PGAAGPAPKP 
ADPVGVLPVV TDRFSTVTVV SGAELARSQP TSLGEALFDK PGLSATTFAP GSASRPIIRG
LDNHRVRILE NGTGVQDMSD LGEDHAVPIN PLINDRIEVI RGPAGLRYGS QAVGGVVSVE
NNRIPTSIPP GGVAGRVTTG YSAVDNGRNA AATVDAGSGN VAVHADAFRS AADDYNTPLG
IQRNSFNESQ GGAFGTSYLF DRGFVGLSFS HFDSVYGIPG ISSAAQRTRL DPVQDKLQAR
GEYRPLDGPF AAIRFWAGGS NYRHNEFGTD ANGVQGIEAV FKNRAAEGRI EFDHVPVETA
FGTFSGQLGF QADRRKLRIS GAEGGLLRPT DTRVQAAYLF EELALGGGLR FQAAGRIEGN
RVAGTQALFP SNFLPDGPGD EPVESRRIRR FAPKSASLSA LQDLPHGFVG SLTGSYVERA
PTSPELFSRG PHEASATFEI GDPNLKPERA RTVEVAIRRA EGPFRLDATG YVTRYTGFVY
KRLTGFTCGD TFDSCGIGGG DLRQVAYSQA GATFAGAEIA SQIDLVPVGD GFAGISAQYD
FVRAQFDDGR FVPRIPPHRV GGGVFLRADG WFAQLSLLHA FAQTQTGTLE TPTPGYNDLK
AEIAYSRPLD PAIHGLSEVT LGLRGTNLLD DVIRNAASFR KDEVVLPGRN VRLFLTARF