Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2312 |
Symbol | |
ID | 7116890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 2432679 |
End bp | 2434652 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643525062 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_002421086 |
Protein GI | 218530270 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.623811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.165216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGC GCACCCTCAA GACGGCGGTG ATGGTCGTCC ACGATCTCGC CGCGACCGCG GCGGCCGTGG TGCTGACCTT CGTCTTCCGC TTTCAGGACG GGGCCCTGGC CGAGCGCCTG CATGCGCTGC CGCTGCTGCT GCCGCCGTTC CTGGCCTATG CCGGGCTGAT CTACGCGTGG TTCCGGCTCT ACCGCACCAA GTGGCGCTTC GCCTCGCTGC CCGACCTCGC CGGCATCGTG CGCGCCGCGA GCGTCACCGC GCTGACGCTG CTTGTGCTCG ACTACGTGCT GGTCTCCTCG AATCTCTACG GGTTCTACTT CTTCGGCAAG GTCGCCATCG TCCTCTACTG GGTCTTGCAG ATCTTCCTGC TTGGCGGGCC GCGGCTGGCC TTCCGCTACC TGAAATACGC CCGCTCCCGG CAGAGCCAGG CCCGCACCGC CACCACGCCG ACGCTGCTGC TGGGCCGCGG CGCCGATATC GAGATCGTGC TGCGGGCGAT CGAATCCGGC TCGGTCAAGC GGCTCTCCCC CAAGGGCATC CTCTCGCCGC GGGCGGACGA GGCGGGCCAG ATGATGCGCG GCGTGCCCGT GCTCGGCGGG TTTCGCGACC TCGAACAGGT GGTCGCGGAC CTCGCCAACC GTGGCCTGCC GGTGCGCCGG CTCGTGGCGA CGCCGAGCGC GCTGGCGCCC GAATCCGAGC CCGACGATCT CATCGCCCGT GCCCGCCGTC TCGGCCTGCC GCTCGCCCGC GTCACCAGCC TCGGCGAGGG GATGCGCGAT GCCGAACTCG CGCCGCTGGA GATCGAGGAT CTGCTCCTGC GCCCCACCGT CGCCATCGAC CGGCCGCGAC TCGAGCGCTT CCTCACCGGC GCCCGCGTCG TCGTCACGGG CGGCGGCGGC TCGATCGGCG CCGAGATCTG CACCCGGGCG GTCGCCTTCG GCGCCTCGGC GCTGCTCGTC ATCGAGAATT CGGAGCCGGC GCTGCATGCC GTCCTCAACG GGCCGGCCCT GCTCCACGCC GAAGCCGCGG TCGAGGGTGC GCTCGCCGAC ATCCGCGACC GCGAGCGGCT GCACGCGATC CTCCGCGATT TCCGGCCCAC TTACGTCTTC CACGCCGCCG CGCTGAAGCA GGTGCCCTAT CTCGAGCGCG ACTGGGTCGA GGGCATTAAG ACCAACGTGT TCGGTTCGAT CAACGTCGCC GAGGCGACGG TGGCCGCGGG CGCCCGCGCC CTGGTGATGA TCTCCACCGA CAAGGCGATC GAACCGGTCT CGCAGCTCGG CGTCACCAAG CGCTTCGCCG AGATGGTCGC GCAGTCTCTC GACGCGGAGC GCTCGGGCCC GGGGGCGACC CGGCTCATCG CCGTGCGCTT CGGCAACGTG CTGGGCTCGG CCGGCTCCGT GGTGCCGGTG TTCAAGGCGC AGATCGCCCG CGGCGGGCCG GTCACGGTGA CCCATGCCGA GATGGTGCGC TACTTCATGA CCGTACGCGA GGCCTCCGAC CTCGTGCTCA CCGCCGCCTC CCACGCCGAC GCGGAAGGGC GCGGCGATAC CGGCGACCAG CGCGCGGCGG TCTACGTGCT GAAGATGGGC CAGCCCGTAC GCATCCGGGA TCTGGCCGAG CGGATGATCC GGCTCGCCGG CTTCGAGCCC GGCGAAGACA TCGAGATTCA GGTGACCGGC GCGCGGCCGG GCGAGCGGCT CAACGAGATC CTGTTTGCCA AGGAAGAGCC GCGTGTGACG CTCGCCGGCA TCGAAGGCGT CATGGCGGCC AAGCCCGTCT TCGCCGACCG CGCGGTACTG GAAGGGTGGA TCGCTCGCCT GCGCGAGGCC GTCACGGCGG GCGACCGGGC GGCGGCGGAA GCCGTGTTCG AGGAGGCGAT CCCGGATTTC CGCAATCGCG CCGGGGCCGT TCCGAACACC AAGCCTGAGA CCATCGCGTC GCCGGCGGCA GCCACCGACG CGGCGACCGC CTGA
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Protein sequence | MQKRTLKTAV MVVHDLAATA AAVVLTFVFR FQDGALAERL HALPLLLPPF LAYAGLIYAW FRLYRTKWRF ASLPDLAGIV RAASVTALTL LVLDYVLVSS NLYGFYFFGK VAIVLYWVLQ IFLLGGPRLA FRYLKYARSR QSQARTATTP TLLLGRGADI EIVLRAIESG SVKRLSPKGI LSPRADEAGQ MMRGVPVLGG FRDLEQVVAD LANRGLPVRR LVATPSALAP ESEPDDLIAR ARRLGLPLAR VTSLGEGMRD AELAPLEIED LLLRPTVAID RPRLERFLTG ARVVVTGGGG SIGAEICTRA VAFGASALLV IENSEPALHA VLNGPALLHA EAAVEGALAD IRDRERLHAI LRDFRPTYVF HAAALKQVPY LERDWVEGIK TNVFGSINVA EATVAAGARA LVMISTDKAI EPVSQLGVTK RFAEMVAQSL DAERSGPGAT RLIAVRFGNV LGSAGSVVPV FKAQIARGGP VTVTHAEMVR YFMTVREASD LVLTAASHAD AEGRGDTGDQ RAAVYVLKMG QPVRIRDLAE RMIRLAGFEP GEDIEIQVTG ARPGERLNEI LFAKEEPRVT LAGIEGVMAA KPVFADRAVL EGWIARLREA VTAGDRAAAE AVFEEAIPDF RNRAGAVPNT KPETIASPAA ATDAATA
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