Gene Mchl_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2154 
Symbol 
ID7116100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2252632 
End bp2253750 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content67% 
IMG OID643524904 
Productpyrroloquinoline quinone biosynthesis protein PqqC 
Protein accessionYP_002420929 
Protein GI218530113 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID[TIGR02111] coenzyme PQQ biosynthesis protein C 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.113038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC AATTCCCGCC GCCCGTCCCG GACACCGAGC AACGCCTGCT GAGCCACGAG 
GAGCTTGAGG CGGCGCTCCG CGATATCGGT GCACGGCGCT ACCACAACCT CCACCCGTTC
CACCGGCTGC TGCATGACGG CAAGCTGTCG AAGGATCAGG TCCGGGCCTG GGCGCTCAAC
CGCTACTATT ATCAGGCGAT GATTCCGGTG AAGGATGCGG CGCTGCTGGC CCGCCTGCCG
GATGCGCAGC TTCGCCGGAT CTGGCGCCAG CGCATCGTCG ATCACGACGG CGACCATGAG
GGCGACGGCG GCATCGAGCG TTGGCTCAAG CTTGCCGAAG GCGTCGGCTT CACCCGCGAC
TACGTGCTCT CGACCAAGGG CATCCTGTCG GCGACCCGCT TCTCGGTCGA TGCCTATGTC
CACTTCGTCT CCGAGCGCAG CCTGCTCGAA GCCATCGCCT CCTCGCTGAC CGAGATGTTC
TCGCCGACGA TCATCTCCGA GCGCGTCGCC GGGATGCTGA AGAATTACGA CTTCATCACC
AAGGACACGC TGGCCTATTT CGACAAGCGT CTGACCCAGG CCCCGCGCGA CGCCGACTTC
GCCCTCGATT ACGTCAAGCG GCACGCGACC ACGCCGGAGA TGCAGCGGGC GGCGATGGAT
GCGTTGACGT TCAAGTGCAA CGTGCTCTGG ACGCAGCTCG ACGCGCTCTA CTTCGCCTAT
GTCGCCCCCG GCATGGTGCC GCCGGATGCG TGGCAGCCGG GCGAGGGCCT TGTCGCCGAA
ACGAACTCCG CCGAGGCCAG CCCCCCCGCC GCGGCCAGCC CCGCCGCGAC GACGGCTGAA
CCTACGGCCT TCTCGGGGAG CGACGTGCCG CGCCTGCCCC GCGGCGTGCG CCTGCGCTTC
GACGAGGTCC GCAACAAGCA CGTGCTGCTC GCCCCCGAGC GCACCTTCGA CCTCGACGAC
AACGCCGTCG CGGTCCTCAA GCTCGTCGAT GGCCGGAACA CGGTTTCGCA GATCGCCCAG
ATTCTGGGCC AGACCTACGA CGCCGACCCG GCCATCATCG AAGCCGACAT CCTCCCGATG
CTGGCTGGCC TCGCGCAAAA AAGGGTTCTG GAGCGATGA
 
Protein sequence
MTAQFPPPVP DTEQRLLSHE ELEAALRDIG ARRYHNLHPF HRLLHDGKLS KDQVRAWALN 
RYYYQAMIPV KDAALLARLP DAQLRRIWRQ RIVDHDGDHE GDGGIERWLK LAEGVGFTRD
YVLSTKGILS ATRFSVDAYV HFVSERSLLE AIASSLTEMF SPTIISERVA GMLKNYDFIT
KDTLAYFDKR LTQAPRDADF ALDYVKRHAT TPEMQRAAMD ALTFKCNVLW TQLDALYFAY
VAPGMVPPDA WQPGEGLVAE TNSAEASPPA AASPAATTAE PTAFSGSDVP RLPRGVRLRF
DEVRNKHVLL APERTFDLDD NAVAVLKLVD GRNTVSQIAQ ILGQTYDADP AIIEADILPM
LAGLAQKRVL ER