| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2145 |
|---|
| Symbol | |
|---|
| ID | 7116091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 2245072 |
|---|
| End bp | 2246877 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643524895 |
|---|
| Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
|---|
| Protein accession | YP_002420920 |
|---|
| Protein GI | 218530104 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.885263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.307838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGG TACATCTCCT CGCACTCGGT GCGGGTCTCG CGGCTGCAAG CCCGGCCCTC
GCCAACGAAA GCGTTCTGAA GGGCGTTGCC AACCCGGCGG AGCAGGTGCT CCAGACGGTC
GATTACGCCA ACACCCGCTA TTCCAAGCTC GACCAGATCA ACGCCAGCAA CGTCAAGAAC
CTCCAGGTTG CCTGGACCTT CTCGACCGGC GTGCTGCGCG GCCACGAGGG CTCCCCGCTC
GTCGTCGGCA ACATCATGTA CGTCCACACC CCCTTCCCGA ACATCGTCTA CGCGCTGGAC
CTCGACCAGG GCGCCAAGAT CGTGTGGAAG TACGAGCCGA AGCAGGATCC GTCCGTGATC
CCGGTCATGT GCTGTGACAC GGTCAACCGT GGTCTGGCCT ATGCCGACGG CGCGATCCTC
CTGCACCAGG CCGACACCAC GCTCGTCTCG CTCGACGCCA AGTCCGGCAA GGTGAACTGG
TCGGTCAAGA ACGGCGACCC GTCCAAGGGT GAGACCAACA CCGCCACCGT TCTCCCGGTG
AAGGACAAGG TCATCGTCGG CATCTCCGGC GGCGAGTTCG GCGTGCAGTG CCACGTCACC
GCCTACGACC TGAAGTCCGG CAAGAAGGTG TGGCGCGGCT ACTCGATCGG CCCGGACGAT
CAGCTGATCG TCGACCCCGA GAAGACCACC TCGCTCGGCA AGCCGATCGG CAAGGACTCC
TCGCTGAAGA CCTGGGAAGG CGATCAGTGG AAGACCGGCG GCGGCTGCAC CTGGGGCTGG
TTCTCCTACG ATCCCAAGCT CGACCTGATG TACTACGGCT CGGGCAACCC CTCCACCTGG
AACCCCAAGC AGCGTCCGGG CGACAACAAG TGGTCGATGA CCATTTGGGC GCGTAACCCC
GACACCGGCA TGGCCAAGTG GGTCTACCAG ATGACCCCCC ACGACGAGTG GGACTTCGAC
GGCATCAACG AGATGATCCT CACGGATCAG AAGTTCGACG GCAAGGACCG TCCGCTGCTG
ACGCACTTCG ATCGTAACGG CTTCGGCTAC ACGCTCGACC GCGCCACCGG TGAGGTGCTC
GTCGCCGAGA AGTTCGATCC GGTCGTGAAC TGGGCCACCA AGGTCGACCT GGACAAGGGT
TCCAAGACCT ACGGCCGTCC GCTGGTCGTG TCGAAGTACT CGACCGAGCA GAACGGTGAA
GACGTGAACT CGAAGGGCAT CTGCCCGGCG GCTCTCGGCA CCAAGGACCA GCAGCCGGCG
GCCTTCTCGC CCAAGACCGG TCTGTTCTAC GTCCCCACCA ACCATGTCTG CATGGACTAC
GAGCCGTTCC GGGTGACCTA CACCCCGGGC CAGCCCTACG TCGGTGCGAC CCTCTCCATG
TACCCGGCTC CGGGCTCGCA TGGCGGCATG GGCAACTTCA TCGCCTGGGA CAACCTCCAG
GGTAAGATCA AGTGGTCCAA CCCCGAGCAG TTCTCGGCTT GGGGCGGCGC GCTCGCCACT
GCCGGTGACG TGGTGTTCTA CGGCACGCTC GAAGGCTTCC TGAAGGCCGT CGACTCGAAG
ACGGGTAAGG AACTGTACAA GTTCAAGACC CCGTCGGGCA TCATCGGCAA CGTGATGACC
TACGAGCACA AGGGCAAGCA GCACGTCGCC GTCCTCTCGG GCGTCGGTGG CTGGGCCGGC
ATCGGCCTCG CGGCCGGCCT GACCGACCCG AACGCCGGCC TCGGCGCGGT GGGTGGCTAT
GCGGCCCTGT CGAGCTACAC CAACCTCGGT GGCCAGCTCA CGGTCTTCTC GCTGCCGAAC
AACTAA
|
|---|
| Protein sequence | MRAVHLLALG AGLAAASPAL ANESVLKGVA NPAEQVLQTV DYANTRYSKL DQINASNVKN
LQVAWTFSTG VLRGHEGSPL VVGNIMYVHT PFPNIVYALD LDQGAKIVWK YEPKQDPSVI
PVMCCDTVNR GLAYADGAIL LHQADTTLVS LDAKSGKVNW SVKNGDPSKG ETNTATVLPV
KDKVIVGISG GEFGVQCHVT AYDLKSGKKV WRGYSIGPDD QLIVDPEKTT SLGKPIGKDS
SLKTWEGDQW KTGGGCTWGW FSYDPKLDLM YYGSGNPSTW NPKQRPGDNK WSMTIWARNP
DTGMAKWVYQ MTPHDEWDFD GINEMILTDQ KFDGKDRPLL THFDRNGFGY TLDRATGEVL
VAEKFDPVVN WATKVDLDKG SKTYGRPLVV SKYSTEQNGE DVNSKGICPA ALGTKDQQPA
AFSPKTGLFY VPTNHVCMDY EPFRVTYTPG QPYVGATLSM YPAPGSHGGM GNFIAWDNLQ
GKIKWSNPEQ FSAWGGALAT AGDVVFYGTL EGFLKAVDSK TGKELYKFKT PSGIIGNVMT
YEHKGKQHVA VLSGVGGWAG IGLAAGLTDP NAGLGAVGGY AALSSYTNLG GQLTVFSLPN
N
|
|---|
| |