Gene Mchl_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2078 
Symbol 
ID7115862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2177590 
End bp2178642 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content72% 
IMG OID643524828 
Productinner-membrane translocator 
Protein accessionYP_002420853 
Protein GI218530037 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0200136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC GGTTCCAGAG GGTTCCAAGC GTCCCGGCCG GCGCCGCCCT GGCCGGACGT 
GTCGGGGCAA TCGTGGCGGC GCTCGCCTGC GTCTGGGTGG TCCTGACGCT CGCCGGCCTC
GCGCCCGGAC GCCTCGGCGC CGAGGTGATC GGCTCCGCCT TCGGCTCCGT CGAGGGGCTG
GAGGATCTCG GGCTCCTTGT CACGCCGCTG ATCCTCACGG GGATCGCGGT GGCGCTGACC
CAGCGCATCG GCCTTTGGAA CATCGGCGGC GAGGGCCAGT TCAACGCCGG CGCGCTGGCC
GCGACCGCCA TCGGCCTCCA TATCGGCGGC GACGACGCCT GGGTTCTGCC ACTGATGGCG
CTCGCCGGAG CGGTCGGGGG CGCGGCCTGG ATCCTGGTGC CGACGCTCGC CCGGGCCTTC
GCGGGGGTGA GCGAACTCAT CACCACGCTC CTGCTGAACT TCGTCGCGGC CCTTCTCGTC
GCGTGGCTCT GCACCGGCCC CTGGCGCGAT CCGTCGGGCC GCGCGCTGGC AACCACGGCA
CGCATCCCTG CCGAACTGCC GCCCCTCGGC GATACCCTGC ACTGGGGCTT TCCCGCCGCG
GTCGCGGTGG CGATCCTTGC GGCCGGACTC CTGGCCTTCA CGCGCTTCGG CTACGAAGTG
CGGATTGCCG GCGCCAACCC TGGGGCGGCG CTCTATGCCG GCATCCCGGT CCGGGCCCGC
ATCGTCGCCG TGATGCTGCT CTCGGGCGCC GTCGCGGGCC TCGCCGGGGC CATCGAACTC
ACCGGGACCG TGCACCGGCT GCAGGGCGGC ATCTCGAACA ATTACGGCTA TCTCGGCATC
ATGGTCGCGG TGCTCGCCCG GGGCTCCTGC CTCGGCGTGA TCGCGGGCGC GGTGCTGATG
GCGGCCCTGC TCAATGCCGG CATCGTGCTG CAGACCCAGG GCGTGAACAC CAGCACGGTG
CTCGCCATCA CCGGACTGAT CCTGCTGTTC ACCGCGATCG GCGACGAGAT CGTGCATTAC
CGGCCCGTGC GCCGGACCCC CATCCTGGGC TGA
 
Protein sequence
MSWRFQRVPS VPAGAALAGR VGAIVAALAC VWVVLTLAGL APGRLGAEVI GSAFGSVEGL 
EDLGLLVTPL ILTGIAVALT QRIGLWNIGG EGQFNAGALA ATAIGLHIGG DDAWVLPLMA
LAGAVGGAAW ILVPTLARAF AGVSELITTL LLNFVAALLV AWLCTGPWRD PSGRALATTA
RIPAELPPLG DTLHWGFPAA VAVAILAAGL LAFTRFGYEV RIAGANPGAA LYAGIPVRAR
IVAVMLLSGA VAGLAGAIEL TGTVHRLQGG ISNNYGYLGI MVAVLARGSC LGVIAGAVLM
AALLNAGIVL QTQGVNTSTV LAITGLILLF TAIGDEIVHY RPVRRTPILG