Gene Mchl_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1950 
Symbol 
ID7116766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2016907 
End bp2017629 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID643524715 
Productcell wall hydrolase/autolysin 
Protein accessionYP_002420741 
Protein GI218529925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.677515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGGA TAAAATTGAG GCATTGGCTG TGGGGCGCGG CGATGCCCTG GGCGCTGATT 
TCGGCCGATG TGTGGGCTTG TTCGCCAGAA CTTTTTCTAG TTGCGATTGA TGTTGGGCAT
CACCGCAGTG CACCTGGTGC GACTAGCGCG TCAAATATCA GCGAATATAA CTACAACCTT
GCTCTTGCTC GAAAAACGCT CGTTGCGCTT CAGTCGAGAG GATTTTCGAG CAGCTTTCTT
ATCGGAGAGA GTGGCGCTGC AATTTCGCTG TCATCTCGTC CCGCACAGGC AGCGAAACGA
TCTGCCTCAG CCTTCGTGTC GATACATCAC GACTCGGTCC AGCCTCGTTA TCTACGTCGC
GGACCGAGAG GCTGGGAGAC CGACTACGCC TCAGGCTTTT CGGTTTTTGT CTCTCGGCGG
TCAGGCCAAG CTAGCCAAGC ATTGGGGAAA GCCATTGGTC GCGAGATGGT TGGATACGGC
TTGTCGCCGT CACTACACCA TGCCGAACCG ATTACGGGTG AAAACCGACC TTTGCTCGAT
CGCAGCATCG GTCTTTATGC CTACGATGAA TTGGCAGTGT TGCGAAACAC GCGCATTCCA
GCTGTCTTGG TCGAGGCCGC TGTGATTACA AATCCTAGTG ATGAACAACA GATCATTTCT
CGAAGACTTC ACGACAATGC GGCGTCAGCA ATTGCGGCTG GAGTGGCGGC ATTCTGCAGA
TAG
 
Protein sequence
MLGIKLRHWL WGAAMPWALI SADVWACSPE LFLVAIDVGH HRSAPGATSA SNISEYNYNL 
ALARKTLVAL QSRGFSSSFL IGESGAAISL SSRPAQAAKR SASAFVSIHH DSVQPRYLRR
GPRGWETDYA SGFSVFVSRR SGQASQALGK AIGREMVGYG LSPSLHHAEP ITGENRPLLD
RSIGLYAYDE LAVLRNTRIP AVLVEAAVIT NPSDEQQIIS RRLHDNAASA IAAGVAAFCR