Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1950 |
Symbol | |
ID | 7116766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 2016907 |
End bp | 2017629 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643524715 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_002420741 |
Protein GI | 218529925 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.677515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGGGA TAAAATTGAG GCATTGGCTG TGGGGCGCGG CGATGCCCTG GGCGCTGATT TCGGCCGATG TGTGGGCTTG TTCGCCAGAA CTTTTTCTAG TTGCGATTGA TGTTGGGCAT CACCGCAGTG CACCTGGTGC GACTAGCGCG TCAAATATCA GCGAATATAA CTACAACCTT GCTCTTGCTC GAAAAACGCT CGTTGCGCTT CAGTCGAGAG GATTTTCGAG CAGCTTTCTT ATCGGAGAGA GTGGCGCTGC AATTTCGCTG TCATCTCGTC CCGCACAGGC AGCGAAACGA TCTGCCTCAG CCTTCGTGTC GATACATCAC GACTCGGTCC AGCCTCGTTA TCTACGTCGC GGACCGAGAG GCTGGGAGAC CGACTACGCC TCAGGCTTTT CGGTTTTTGT CTCTCGGCGG TCAGGCCAAG CTAGCCAAGC ATTGGGGAAA GCCATTGGTC GCGAGATGGT TGGATACGGC TTGTCGCCGT CACTACACCA TGCCGAACCG ATTACGGGTG AAAACCGACC TTTGCTCGAT CGCAGCATCG GTCTTTATGC CTACGATGAA TTGGCAGTGT TGCGAAACAC GCGCATTCCA GCTGTCTTGG TCGAGGCCGC TGTGATTACA AATCCTAGTG ATGAACAACA GATCATTTCT CGAAGACTTC ACGACAATGC GGCGTCAGCA ATTGCGGCTG GAGTGGCGGC ATTCTGCAGA TAG
|
Protein sequence | MLGIKLRHWL WGAAMPWALI SADVWACSPE LFLVAIDVGH HRSAPGATSA SNISEYNYNL ALARKTLVAL QSRGFSSSFL IGESGAAISL SSRPAQAAKR SASAFVSIHH DSVQPRYLRR GPRGWETDYA SGFSVFVSRR SGQASQALGK AIGREMVGYG LSPSLHHAEP ITGENRPLLD RSIGLYAYDE LAVLRNTRIP AVLVEAAVIT NPSDEQQIIS RRLHDNAASA IAAGVAAFCR
|
| |