Gene Mchl_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1824 
Symbol 
ID7113552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1879042 
End bp1879923 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID643524588 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_002420615 
Protein GI218529799 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.251617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCG AGATCAAGAC GGTCGGCATC GTCGGTGCCG GCCAGATGGG GAACGGCATC 
GCGCATGTCT GTGCGACCTC GGGCCTCCAC GTTCGGCTGA ACGACCGCGA TCCGCAGCGG
ATCGATGCCG GTCTCGCGCT GATCGACGCG AACCTCACGC GTCAGGTCCA GAAGGGAACG
CTGAGCGACG AGCAGCGCCG CAGCGCCCTG GACCGCATCG CGGCGGCCCG CAGCTACGAC
GACCTCGCGC CCTGCGACCT CGTCATCGAG GCCGCCACCG AGGACGAGGC GACCAAGCGC
AAGATCTTCC AGGCGCTCTG CCCCTCGCTC AAGCCCGACG CCTTGGTCGC GACCAACACT
TCCTCGATCT CGATCACGCG GCTCGCCGCG GCGACCGACC GGCCGGACCG CTTCATCGGC
ATCCACTTCA TGAACCCGGT GCCCGTGATG CAGCTCGTCG AGCTGATCCG CGGCATCGCC
ACCGAAGATC CGACCTACGA ATCGGCCAAG GCTTTCATCG CCCGGCTCGG CAAGACCTCG
ACCATGTCGG AGGACTTCCC GGCCTTCATC GTCAACCGCA TCCTGCTGCC GATGATCAAC
GAGGCGATCT ACACGCTCTA CGAGGGCGTG GGCTCGGTCG AGTCGATCGA TACCGCGATG
CGGCTGGGCG CGAACCACCC GATGGGGCCG CTGCAGCTCG CCGACTTCAT CGGCCTCGAT
ACCTGTCTGT CGGTGATGCA GGTGCTCTAC GAGGGGCTGG CCGATTCGAA ATACCGCCCC
TGCCCGCTGC TGGTGAAGTA CGTCGAGGCC GGCTGGCTCG GCCGCAAGAC CAAGCGTGGG
TTCTACGATT ACCGCGGCGA GACGCCGATC CCGACGCGCT GA
 
Protein sequence
MGIEIKTVGI VGAGQMGNGI AHVCATSGLH VRLNDRDPQR IDAGLALIDA NLTRQVQKGT 
LSDEQRRSAL DRIAAARSYD DLAPCDLVIE AATEDEATKR KIFQALCPSL KPDALVATNT
SSISITRLAA ATDRPDRFIG IHFMNPVPVM QLVELIRGIA TEDPTYESAK AFIARLGKTS
TMSEDFPAFI VNRILLPMIN EAIYTLYEGV GSVESIDTAM RLGANHPMGP LQLADFIGLD
TCLSVMQVLY EGLADSKYRP CPLLVKYVEA GWLGRKTKRG FYDYRGETPI PTR