Gene Mchl_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1788 
Symbol 
ID7114583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1840980 
End bp1842632 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content68% 
IMG OID643524552 
Productmalate:quinone oxidoreductase 
Protein accessionYP_002420579 
Protein GI218529763 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0152962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0435205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGA ACCGGCGTCA CGTTCTCGGC GGCGCGCTGG CGGGTCTGGC GGCGACGGCT 
CTGCCGGGCT CGTCCCTGCT CGCGGCGGAC GAGCCCCGCA AGGTCGATGT CCTGCTGATC
GGCGGCGGCA TCATGAGCGC GACGCTCGGT GTCTGGCTGC GCGAGCTCGA GCCCGACTGG
TCGCTGGAGA TGGTCGAGCG GCTCGACGGC GTGGCCCTGG AAAGCTCCAA CGGCTGGAAC
AATGCCGGCA CCGGCCATTC GGCCCTGGCC GAGCTGAACT ACACCCCGGA GGATTCCAAG
GGGAACGTCC AGATCAACAA GGCCGTCGAG ATCAACGAGG CCTTCCAGGT CACGCGCCAG
TTCATGGCCT GGCAGGTCCA GAAGGGCGTG CTGAAGAACC CGCGCTCCTT CATCAACTCC
ACGCCCCACA TGAGCTTCGT CTGGGGCGAC GACAACATCA CCTTCCTGCG CAAGCGCTAC
GAGGCGCTGA AGGCGAGCCC GCTGTTTGCC GGGATGGAGT TCTCGACCGA CCCCGAGCAG
GTCAAGAAGT GGGTCCCCCT GATGATGGAG GGCCGCGACC CGAAGCAGAA GGTCGCCGCT
ACGTGGTCGC CGCTCGGCAC CGATTGCGAG TGGGGCGAGG TCACCCGCCA GTACATCGCC
TCGCTGAAGA GCGGCCCGAA GTTCGACCTG CGCCTCTCGA CCGAGGTCGA GAGCTTCGAG
CGCAACAAGG ACGGGACCTG GCGCGTCACC TCGAAGAACC TGAAGGACGG CAGCCGCCAC
ACGGTCGATG CCCGGTTCGT GTTCATCGGC GCGGGCGGCG GCGCGCTGCA CCTGCTGCAG
GCCACCGGCA TTCCCGAGGC CGACGAGTAT GGCGGCTTCC CCGTCGGCGG CTCGTTCCTC
GTCACCGATA ACCAGGACGT GGCCCTGCGC CACCTCGCCA AGGCCTACGG CAAGGCCTCG
GTCGGCTCGC CGCCGATGTC CGTGCCGCAC CTCGACACGC GGGTGCTCGA CGGCAAGCGC
GTGATCCTGT TCGGACCGTT CGCGACCTTC TCGACCAAGT TCCTGAAGGA AGGCTCGTAT
TTCGACCTGC TGACCTCGAC CACCACCAGC AATGTCTGGC CGATGGTCCG CGTCGGCGTC
GAGCAGTACC CGCTGATCGA GTACCTCGCC GGCCAGGTGA TGCTGTCCGA CGAGGACCGC
TACCAGGCCC TGCGCGAGTA CTTCCCCGAT GCGAAGAAGG ACGAGTGGCG CCTCGTCCAG
GCCGGGCAGC GCGTGCAGAT CATCAAGCGC GACCCGGAGA AGGGCGGCGT GCTCAAGCTC
GGCACCGAAG TCGTGAGCGC CAAGGACGGC AGCATCGCCG CCCTGCTCGG CGCCTCGCCG
GGCGCCTCCA CCGCCGCGCC GATCATGCTG ACCGTGCTGG AGAAGGTGTT CGCGCAGAAG
GTCGCCAGCC CCGAATGGCA GGCGAAGATC CGCCAGATCG TGCCGAGCTA CGGCACGAAG
CTGAACGGCG ATCCGCAGCG GGTGCAACAG GCGCTGGCCT ATACCAGCGA GCACCTGCAG
CTCACCCCGC CGCCGCAGAT CGGCACCCCG GCCCAGCCGA CGCCCGCATC CGAGATGGGG
ACCGTCAAGT CGGTCCCCGA CATGGCACCG TAA
 
Protein sequence
MPMNRRHVLG GALAGLAATA LPGSSLLAAD EPRKVDVLLI GGGIMSATLG VWLRELEPDW 
SLEMVERLDG VALESSNGWN NAGTGHSALA ELNYTPEDSK GNVQINKAVE INEAFQVTRQ
FMAWQVQKGV LKNPRSFINS TPHMSFVWGD DNITFLRKRY EALKASPLFA GMEFSTDPEQ
VKKWVPLMME GRDPKQKVAA TWSPLGTDCE WGEVTRQYIA SLKSGPKFDL RLSTEVESFE
RNKDGTWRVT SKNLKDGSRH TVDARFVFIG AGGGALHLLQ ATGIPEADEY GGFPVGGSFL
VTDNQDVALR HLAKAYGKAS VGSPPMSVPH LDTRVLDGKR VILFGPFATF STKFLKEGSY
FDLLTSTTTS NVWPMVRVGV EQYPLIEYLA GQVMLSDEDR YQALREYFPD AKKDEWRLVQ
AGQRVQIIKR DPEKGGVLKL GTEVVSAKDG SIAALLGASP GASTAAPIML TVLEKVFAQK
VASPEWQAKI RQIVPSYGTK LNGDPQRVQQ ALAYTSEHLQ LTPPPQIGTP AQPTPASEMG
TVKSVPDMAP