Gene Mchl_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1678 
Symbol 
ID7116823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1730523 
End bp1731536 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content76% 
IMG OID643524442 
Producthigh-affinity nickel-transporter 
Protein accessionYP_002420469 
Protein GI218529653 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0510109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.482809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA CCGCGACCCT GCGCCCCGCG GGTGTCGCCG GCAGCCGGTG GCCGCTGCGG 
CTGGCGCTCG CCGCCGGGGC GGTGCTGGCG GCCGCCGGCC TCCTCGCCGG CATCGTCTGG
GCGCTCGGCC CCGTTGCCGC GCCGCCGCCG CGCTCGCCCT TCGGCATCGG TTTTCGCGAG
GCCGCGCCCG CTACGACCGG ACTCGGCGGC TGGCTGCTCA CAGTCCAATC CAACTTTTCG
AGCCAGCTTC GGGCTGCCGT GTCGGCCTTG AAGGCGGGCG GCCCCTGGAT GCCGCTCATC
GTGATGGGCT TCGCCTACGG CGTGTTCCAC GCCGCCGGGC CCGGCCACGG CAAGGCGGTG
ATCGCCGGCT ACATCGTGGC GGGCGAGCGT ACGCTGCGGC GCGGCTTTGC CCTGAGCGCC
GCGGCGGCCC TGCTCCAGGC TCTCGTGGCC ATCGCCATCG TGCTGGTCGG CGTCCTCGTC
CTCAACACGA CCGCCGCCGG GATGACGCGG GCCGGCACCC TGATCGAGAC CGTGAGCTTT
GCCCTCGTGG CGGGGCTCGG CGCCGCGGTG ACGTGGCGCA AGGCGGGGCG GCTAGCCGGC
CTTGCCACCG ATGCACCGCC CGAGGCGTGC GGCCCCGGCT GCGGCCATAC CCACCTGACC
GATGCCGCCG CCCTCGACCG GCTCGGCGGC TGGCGCGAGC GGGCGGGCGT GGTGCTCGCC
GCCGGCTCGC GCCCCTGCGC CGGGGCGGTG CTGATCCTCG TGTTCTGCGC CGCGCAAGGC
CTGCTCGCCG CCGGCATCGC CGCGACCTTC GCCATGGCGC TCGGCACCGC GCTCACCACC
GGGGCCTTGG CGAGCCTCGC GGTGTTCGCC AAGGCCCTGG CGCTGCGCCT CGCGGGCGGG
CGCGGGCAGG CCGGCGCGCT GGCGGTCGGC GGGCTCGAAT TGCTGGCCGG TGCCTTCGTG
CTGGTGCTCG GGCTTGCCAT GCTGTCGGGG CTGGCCACTG GCATGGGTGG CTAG
 
Protein sequence
MSLTATLRPA GVAGSRWPLR LALAAGAVLA AAGLLAGIVW ALGPVAAPPP RSPFGIGFRE 
AAPATTGLGG WLLTVQSNFS SQLRAAVSAL KAGGPWMPLI VMGFAYGVFH AAGPGHGKAV
IAGYIVAGER TLRRGFALSA AAALLQALVA IAIVLVGVLV LNTTAAGMTR AGTLIETVSF
ALVAGLGAAV TWRKAGRLAG LATDAPPEAC GPGCGHTHLT DAAALDRLGG WRERAGVVLA
AGSRPCAGAV LILVFCAAQG LLAAGIAATF AMALGTALTT GALASLAVFA KALALRLAGG
RGQAGALAVG GLELLAGAFV LVLGLAMLSG LATGMGG