Gene Mchl_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1330 
Symbol 
ID7113652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1368570 
End bp1369715 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content74% 
IMG OID643524107 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002420142 
Protein GI218529326 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.135454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.523473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGG CCGCCGCGTC CCTCGATACC GTCCGGCGTC TGGCCGAGAA CTTTGCCGCG 
GAAGCCGGTG AGCGCGATCG CGCCGGCGCC TTTCCGCACG GGCCGATCGC ATCTCTGCGC
GAAGCAGGTC TGATCGGGCT CACCGTGCCG GAACGGCTCG GAGGCGGCGG GGCCGGGCTG
GCGCGGGCGG TGCAGGTCGT CGGTACGCTC GGTGCCGGCG ATCCGGCGGT CGCCCTGGTG
CTGGCGATGA CGCTGCTCCA GCACGGGCTG ATCCACCGCG CCGGCACGCC CTGGCCGCGT
GCGCTCGCGG ACACGGTCGG GCGCGACGCG GTGACGAAGG GCGCCCTCAT CAATGCGCTC
TGGGTCGAGC CCGATCTCGG CACACCTGCC CGCGGCGGCC TGCCGGGCAC GCTCGCCCGG
CGCGATGGTG ACGACTGGCG GGTATCGGGC CGAAAGATCT ACTCCACCGG CGCGCCGGGC
CTCGCCTACG GCGTCGTCTT CGTGCGCACC GACGAGCCGG AGCCGCGGGT CGGCAACCTG
CTGGTGCCGA TGTCGTCCCC GGGCATCCGC ATCGAGGAGA CCTGGGACCA TCTCGGCCTG
CGCGCCTCGG GCAGCCACGA CGTGGTGTTC GAGGACGTGC GGGTGCCGGG CGACCACGCG
GTCGATCTGC GCCGCCCGGA GGAATGGCGC CGGCCCGATC CGCTGCAGCA GGCCTGGAGC
TGCACCCTGC TCGCCGCCCT CTACGACGGG GTCGCACAGG CGGCGCAGGC GTGGTTCCGG
CACTTCCTGC ACGAGCGCGT GCCCGGCAGC CTCGGGGCAC CGCTCGCCAG CCTGCCGCGC
TTTCACGAGG CCGTGGGCGA GAACGAGCGG CTCCTCTCCG TCAACGCCCG GCTCGTGGCC
AGCCTCGCCG CCGAGACCGA TGCGGGCGCG CTGCCGGCCC CGCAGGAGGC GGGCTTCGTC
AAGCTGACCG TGACCGAGAA CGCGATCCAG GCAGTGCAGC GGGTGGCCGA ATTCTGCGGC
AACGCCGCGC TCTCGCGAAA AGCGCCGCTG GAGCGGCACC TGCGCGACGT CCTGTGCGCG
CGCATCCACT GGCCGCAGGG CGACGCGGTG CGGATTGCCG CCGGCCGCGC CGCGCTCGGT
GTCTGA
 
Protein sequence
MTMAAASLDT VRRLAENFAA EAGERDRAGA FPHGPIASLR EAGLIGLTVP ERLGGGGAGL 
ARAVQVVGTL GAGDPAVALV LAMTLLQHGL IHRAGTPWPR ALADTVGRDA VTKGALINAL
WVEPDLGTPA RGGLPGTLAR RDGDDWRVSG RKIYSTGAPG LAYGVVFVRT DEPEPRVGNL
LVPMSSPGIR IEETWDHLGL RASGSHDVVF EDVRVPGDHA VDLRRPEEWR RPDPLQQAWS
CTLLAALYDG VAQAAQAWFR HFLHERVPGS LGAPLASLPR FHEAVGENER LLSVNARLVA
SLAAETDAGA LPAPQEAGFV KLTVTENAIQ AVQRVAEFCG NAALSRKAPL ERHLRDVLCA
RIHWPQGDAV RIAAGRAALG V