Gene Mchl_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1237 
Symbol 
ID7117932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1255275 
End bp1256327 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID643524016 
ProductPlatelet-activating factor acetylhydrolase plasma/intracellular isoform II 
Protein accessionYP_002420051 
Protein GI218529235 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGAAG ACGCAATCCC GCGCCTCGGC TACAGCCGGC GTCGCTTCAC GGCCATGGTC 
GTCGGCGGCT TCGCGACAGG CGTGGTCACG CGCGCGATCT GTCCGGCCGA GGCGGCGCCC
GAGGACGTCC GTATCGCAGA TCTGGACTGG GTTGATACCC GTCGCGACCG CCGCGTTCCG
GCGCGCTTGT ACTGGCCGTC GCCGGGGGTA CCGGCGGGGC CTGTTCCCTT GATCGTCTTC
TCGCACGGCC TCGGTCAGTC GCGGACCGGC TACAGCTATC TCGGGCGCCA CTGGGCGGCC
AACGGCTACG CCAGCCTTCA CGTGCAGCAC GTCGGAAGCG ACGGCAGCGT GTGGGCCGGC
AATCCGTTCG AGGTTCTCGA TCGCGTGAAC GTGGCAGCGG ACGAACGCGA GGCGATCGCT
CGGGCCGCCG ACGTGAGCTT CGCTCTGGAC CGGATCCTCG ACAAGGACAG CGCCTTCGCC
GCGTTCATCG ACCGGGCGCG TATCGTCGCC GCCGGCCATT CCTACGGTGC GAACACGACC
TTGATCGTCG GCGGGGCGCG CGTTGTTCGC GAAGGGCGGA CAATCGATCG TAGGGACATG
CGCTTCAAGG CCGGCATCGT CATCTCGGCG CCGCCCTTCT ACGGCGAGCG CGACCTGCAC
GCCGTGCTCG CGGCCATCAC CATCCCAACC TTCCACGTGA CCGCGACTGC GGACGTCATC
GCGTTGCCCG GACGACGGTC GCCCGTGCAG GATCGTCTTG AGGTCTACGA GGCGGTCGGG
ACGACAAGGA AGGCGCTGGC GGTCTTCCAG GGCGGGTCGC ACAGCATCTT CACCGACCGG
CTGCTGACAG GCGGAGTAAC GCTCAATCCG CAGGTCAAAC AGGCGACCGC AGAAGGCGCG
CTGGCCTTCC TCGACCTGGC ATTCCGAGGC GACCCCTCAC CGTTGGCGTC ATGGAGCGAG
GCCTGGAGCC CGCTCCTCGC CGTGGCGCCC ACAGCTTACC TCGTCACCGA ATCGTCGCGG
CACCCATCAC GCCGATATCG TCCCCGCTCG TAG
 
Protein sequence
MREDAIPRLG YSRRRFTAMV VGGFATGVVT RAICPAEAAP EDVRIADLDW VDTRRDRRVP 
ARLYWPSPGV PAGPVPLIVF SHGLGQSRTG YSYLGRHWAA NGYASLHVQH VGSDGSVWAG
NPFEVLDRVN VAADEREAIA RAADVSFALD RILDKDSAFA AFIDRARIVA AGHSYGANTT
LIVGGARVVR EGRTIDRRDM RFKAGIVISA PPFYGERDLH AVLAAITIPT FHVTATADVI
ALPGRRSPVQ DRLEVYEAVG TTRKALAVFQ GGSHSIFTDR LLTGGVTLNP QVKQATAEGA
LAFLDLAFRG DPSPLASWSE AWSPLLAVAP TAYLVTESSR HPSRRYRPRS