Gene Mchl_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1220 
Symbol 
ID7117915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1236540 
End bp1237664 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content72% 
IMG OID643524001 
Productprotein of unknown function DUF1022 
Protein accessionYP_002420036 
Protein GI218529220 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3660] Predicted nucleoside-diphosphate-sugar epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATCGA AGGTTTTGCG TCGCGTGAAC GAACAGGGGC CGGTGCAAGG GCGGGCGCAA 
GCGCCGGTGA AGCCCGACGA TAGCGTACCG CCGGAGCTCG CGCGGGCCCG CGTCTGGATC
CTCACCGACG GCAAGGCCGG CGACGAGAAC CAGTGCATCG GCATCGCCGA GGCGCTCGGC
CTCGCCTACG AGACGCGGCG AATTCCGGAC GGACGGCCCC TGACCTGGAT GGCCCCGTGG
GGGCCGATCG ACCCGCGGGA CGCGCCGGGC CGGGCCGGCG GCCTGCTGCA AGGCCCGCTT
CCCCATCTCC TGATCGCCTC GGGGCGGCGT GCCGTACCCT ATCTGCGCGC TGTGCGCCGC
GCCTCGGACG AGAAGACCTT CACGGCCTTC CTCAAGGACC CGCGCACCGG CCACGACACT
GCGGACTTCA TCTGGGTTCC CGACTACGAC GATCTGCGCG GCCCCAACGT CTTCACCACC
CTCACCGCGC CGCACCCCGT CTCCCGCGCC CGGCTCGACG CCGCCCGCAC GACCCCCGAT
CCGCGTCTCG CGCGCCTGCC CTGGCCGCGC ATCGCCGTGC TGATCGGCGG GGACAGCCGG
CATCTGCGTT ACCGCAAAGC CGACATGCAG CGGCTCGTGC GCGATCTCAC CAAGCTTGCC
GAGGGCGGCT GCTCGCTGAT GCTGACGGTG TCCCGGCGCA CGCCGCCGGA CCTGCGCAAA
GCCCTTGAGG ACTTGGTGAA GGACAAGGGC GGCTTCTTCT GGGACGGCAG CGGCGAGAAC
CCTTACGTCG GCATGCTGGC GATCGCCGAC CACATCGTCG TCACCTCCGA TTCCGCCAAC
ATGGTGGGCG AGGCCGCGAG CACCGGCGTG CCCCTCCTGC TGTTCGACCT GCCGCGTACC
TATATCCGCC ACCGGCGGAT GTTCGCGGGC CTCGCCATGG CCGGCGCGCT GAAGCCGTTC
ATCGGGCGCC TGGAGGCGCT GCGCTACGCC CCGATCGACG CGACGCCGGA GATCGCGGCG
GCGCTGGCGG AGGGTTACCA GCGGCACCGC GCGCGCTTGG CCGGGGAGAT AGCAGCGGTG
CCGCGCCCGG CCGAACCGAC GTCTGCCCCA CGCGGACCGT TCTGA
 
Protein sequence
MGSKVLRRVN EQGPVQGRAQ APVKPDDSVP PELARARVWI LTDGKAGDEN QCIGIAEALG 
LAYETRRIPD GRPLTWMAPW GPIDPRDAPG RAGGLLQGPL PHLLIASGRR AVPYLRAVRR
ASDEKTFTAF LKDPRTGHDT ADFIWVPDYD DLRGPNVFTT LTAPHPVSRA RLDAARTTPD
PRLARLPWPR IAVLIGGDSR HLRYRKADMQ RLVRDLTKLA EGGCSLMLTV SRRTPPDLRK
ALEDLVKDKG GFFWDGSGEN PYVGMLAIAD HIVVTSDSAN MVGEAASTGV PLLLFDLPRT
YIRHRRMFAG LAMAGALKPF IGRLEALRYA PIDATPEIAA ALAEGYQRHR ARLAGEIAAV
PRPAEPTSAP RGPF