| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0985 |
|---|
| Symbol | |
|---|
| ID | 7114753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 1007263 |
|---|
| End bp | 1009314 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643523787 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_002419829 |
|---|
| Protein GI | 218529013 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0130271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTC AGGGCCGCAA GCAAGCTGCA GCCGTCGGCA GCGGAGCGTC CGCACTCGAC
GGAACAGGGC GGGAGGCGGT TGCGAGGCGA CTGCTGCAAC TGCTCGATCC AGATTTCTTC
TCCCATTCCG CCCCATCCGG CCCAGGAGAT CCGCCGGCCC GGCGAAACGT GCGCGCGGCG
AAGCGGGAAG AAATCTCTTC GCCCGACGTC GTAGGTGCGA CCGTACTGCT CGGCTTCGAA
CTCGGCGCGC GAACCGAGTT GCTCGAGCGG ATTGAGACCG AGGCTCCGGT GATCGTCGTG
ACAGTGCCCG GCGCGGATTG GATCGATCCG ATGGCGAAGG CAGCGACCGG CTGCTTCGGA
GCAAGGGCGT CACGGACACG CGCGCGCCCC CGAGAACATG GCGCGGGACA CGATCCGGAC
TCCGGCCCAG CGGGCGCGGT CGTCGTCGCA GCCCGGGGTG GCCTCGGGCC TCATTCCGGC
GGCGGTTGCT CTAAGACTGC GTCCGCCTTC TGGCACCATC AAGCTCTGAT CGGGATTGCA
ACCCCGTCCG GAACCGGCCT CCCGCCCGAT CTCCTGCGGG CCTGCGAGGA ACGCGTCGCC
GTCGGCAACT TCGAGCCCGA GGCCATTGCG CTCGTCGTGG AGCATGTGAC CGGTTCCCGG
CCTGACCGGC AGATGCCCGG GGACATTGCC GCTGCGGTCG AGCCGACGGA CCTGAGGGTC
GGCATCCATC GGGCCCGCGG CGCAGACGGC TCGATCGACC GACTCGCCGC CGTGGTCCGC
ACCAAGCTCG GAGTCCGGGT ACGTCAGGCT GGCCCGCGCC TCAGGGATCT CGCCGGCTAT
GGTGAGGCTG GCGAGTGGGG CATGGCGGCG GCCGCCGATC TCGCGGCCTA TGGCCGGGGC
GAGTTACTTT GGTCGTGCTG CGAGCCCGGC GTCCTGTTGT TCGGTCCTCC TGGTACGGGC
AAGACACTTT TCGCTTCCGC GCTGGCGAAC GAAGCTGGCG TGCCATTGCT CACGGGTTCG
CTGGCGCAGT GGCAGGCTGC GGGCGAAGCG CATCTCGGCA CTACGCTGAA GGCCATGCGC
CAGTTCTTCG AAACTGCGAT GTGTACGGCA CCCTGCATCG CGCTGCTGGA CGAACTGGAT
TCCTTCGGTA ACCGACAGCG GTTCCCAGAT CACAACCGCA ACTACTCGAC CCAGGTTGTG
AACGGCCTGC TTGAATGCCT GGATGGTGAG GGCCGGCGGC CCGGCGTCGT CCTAGTCGGT
ACCACGAACA ATGCCGATTC GATCGATCCG GCGATCCTGA GGTCCGGCCG CTTCGACCGA
TCCATCGCCG TGCCGCTGCC GTCGACATCC GATCTCGAGG CGATCCTCCG GCACTACCTT
GGTGACGGCA TCGCCAGCGA ACATCTTGCC GAGGCCGCGC GACGTGCTTC AGGCGGTACC
GGTGCCGATT GTGCCGCCTG GGCGCGGCGA GCGCGTGGTC GTGCACGCCA CGCCGGTCGC
GCTCTCGAAC CTGCCGACCT TCTGCGCGAG ATCGATGGAT CGTTTTCCAG CGCCGAGACT
GAGCAGGACT GGCGCATCGC GACCCACGAG AGCGGACACG CGGTCGTGGC TCATGCGCTT
GGCATGAAGA CCGAACAGAT CGTCCTGCGT TCGCCTGGTC ATCGCAATGC AGGCTTCACG
TTGTTGCGGC TGTCGAGCGA GCTCACACGA AGCGTGGTGC ACGACATTCT CGCCGTACAC
TTGGCCGGGC GCGAAGCGGA GATCCTGGTG TTGGGTGAAC CTTCGGTTGG AGCCGGCACA
GACCTCGCGT ACGCGACGGA CATCTGCACC GATATGCACT GTCGCTGGGG GCTCGGGGAA
CGTATCGCGG TTTGCGATCC GACAATGCAC GTTCGGAAGG TTCGGACGTC CGTCGAGCGG
GATCTGCGCC GGGCATCGCA GAGAGCGCTG GAGATCCTGT CGCAACATCG AACAAGCCTC
GACCGTCTTG CGCGAGCTCT GATGGAGCAA CGATCGCTCG ATGGAGATGT CGTTGCCGCC
ATGATCGAGT GA
|
|---|
| Protein sequence | MTPQGRKQAA AVGSGASALD GTGREAVARR LLQLLDPDFF SHSAPSGPGD PPARRNVRAA
KREEISSPDV VGATVLLGFE LGARTELLER IETEAPVIVV TVPGADWIDP MAKAATGCFG
ARASRTRARP REHGAGHDPD SGPAGAVVVA ARGGLGPHSG GGCSKTASAF WHHQALIGIA
TPSGTGLPPD LLRACEERVA VGNFEPEAIA LVVEHVTGSR PDRQMPGDIA AAVEPTDLRV
GIHRARGADG SIDRLAAVVR TKLGVRVRQA GPRLRDLAGY GEAGEWGMAA AADLAAYGRG
ELLWSCCEPG VLLFGPPGTG KTLFASALAN EAGVPLLTGS LAQWQAAGEA HLGTTLKAMR
QFFETAMCTA PCIALLDELD SFGNRQRFPD HNRNYSTQVV NGLLECLDGE GRRPGVVLVG
TTNNADSIDP AILRSGRFDR SIAVPLPSTS DLEAILRHYL GDGIASEHLA EAARRASGGT
GADCAAWARR ARGRARHAGR ALEPADLLRE IDGSFSSAET EQDWRIATHE SGHAVVAHAL
GMKTEQIVLR SPGHRNAGFT LLRLSSELTR SVVHDILAVH LAGREAEILV LGEPSVGAGT
DLAYATDICT DMHCRWGLGE RIAVCDPTMH VRKVRTSVER DLRRASQRAL EILSQHRTSL
DRLARALMEQ RSLDGDVVAA MIE
|
|---|
| |