Gene Mchl_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0429 
Symbol 
ID7116437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp414207 
End bp415448 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content71% 
IMG OID643523229 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002419293 
Protein GI218528477 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG CCCGGACCCT GGCCGTTCCG GCCCTGGTGC TCACTGCCCT TAGCTTCGGT 
CCCGCATGGG CCGAGAACGC CCCGCCCCCG GCGAAGACCG CCCCGGCGGC CACCGTCAGC
GTGGTCGAAG CCGAGCGGCG CGAGATCGTC GAGAGCGTGG TCGTGACCGG TACCCTGGTG
CCGCGCGACG AGATTCTCGT GACGCCCGAG ATCGACGGCT ACCGTCTCGT CGAGCTGCTG
ACCGAGGAGG GCATGCGCGT CGAGAAAGGG CAGGTGCTGG CCCGCCTCAA TCGCGATCTG
ATCGACCGTC AACTCAGCCA GCAAAATGCG CTGATCGACA AGGTGAGTGC CGCCGTTCTC
CAGGCGCAGA GCAACATCGA ACAGGCCGAG GCCGCCGAAC TCGAAGCGCG GCTGGCCCAT
GATCGCGCCA AGCAACTGAT CCAGACCGGC ATCACCACCG CGGCCGTCAT GGAGAATCGC
ACCGCCGCCC TGCGGCAGGC AGAGGGCAAG CTCGCCTTCG CCCGCAACGG GCTGGCGATG
GCCAAGGCCG AATTGGCGCA GGCCAAGGCC GTGCGCGACG AACTCGAACT GCGCCTCGCC
CGCACCGAGA TCCGCGCGCC GGAAGCCGGC ATCGTCAGCC GCCGCACGGC GCGCGTCGGC
ATGGCGACGT CCGCCTCGGC CGAGCCGCTG TTCCGGCTGA TCGCCCGCGG CGAGATCGAG
CTGGAAGCAG AAGTCATCGA GACCAAGCTG CCGCTACTGC GCGAGGGCGC TCCCGCCTTC
ATCGAGATCG GCGAGGGCGA GCGCGTCACG GGCAGCGTCC GCGCGGTCTA CCCGGAGGTC
GACAAGGCGA GCCGGCTCGG CAAGGTCCGC GTCCGCCTCG ATCCCGATCC GCGCCTGCGC
ATCGGCACCT TCGCCCGCGG GGCCGTCGAA CTCGCCCGCA CCCGCGGCGT CACGGTTCCC
CAGGCCTCCG TCCTCTACGG CGGCGGAAAA CGAAGCTCCG TGCTCGTCGT CGCGGAGGAC
AAGGTCGAGT CCCGCGAGGT CCGCACCGGC CTGTCCGACG ATGACGACAT CGAGATCCGC
TCCGGCCTCG CGGAAGGCGA GCGGGTCGTG GCCCGCGCTG GCAGCTTCCT GCGCGACGGC
GACCGCGTCC GCCCGGTTTC GCTCGCGCGG CAGGGCCAGA CACCAGCCGC GGTCTCGGCC
GCCCCCTCGC CGCAGGCCAC CGCCGACGCC GGCTCGCGCT GA
 
Protein sequence
MIRARTLAVP ALVLTALSFG PAWAENAPPP AKTAPAATVS VVEAERREIV ESVVVTGTLV 
PRDEILVTPE IDGYRLVELL TEEGMRVEKG QVLARLNRDL IDRQLSQQNA LIDKVSAAVL
QAQSNIEQAE AAELEARLAH DRAKQLIQTG ITTAAVMENR TAALRQAEGK LAFARNGLAM
AKAELAQAKA VRDELELRLA RTEIRAPEAG IVSRRTARVG MATSASAEPL FRLIARGEIE
LEAEVIETKL PLLREGAPAF IEIGEGERVT GSVRAVYPEV DKASRLGKVR VRLDPDPRLR
IGTFARGAVE LARTRGVTVP QASVLYGGGK RSSVLVVAED KVESREVRTG LSDDDDIEIR
SGLAEGERVV ARAGSFLRDG DRVRPVSLAR QGQTPAAVSA APSPQATADA GSR