Gene Mbur_2280 details

Gene Information

• Locus tag: Mbur_2280
• ID: 3997234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 2407995
• End bp: 2408573
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637960007
• Product: DNA-directed RNA polymerase subunit E'
• Protein accession: YP_566890
• Protein GI: 91774198
• COG category: [K] Transcription
• COG ID: [COG1095] DNA-directed RNA polymerase, subunit E'
• TIGRFAM ID: [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000000121827
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAAAA GGATGAAACT TAAGGATACG ATCCGTGTGG CTCCCCGTCT GTTGGGCGAA 
GATGTAGGAG TTAGCGTAAA GGATGCGTTA AAGGAGAAGC TTGAGGGCAG GGTCGATAAG 
GCACTGGGCT CCATTGTCGC TATCACTGAT ATTGAAGAAG TGGGTGAAGG GCATATCCTT 
GTAGGAGACG GAGCTGTCTA TTACGATGTG ATCTTCGAAG CTATCATATT CATCCCACAG 
CTTCAAGAGG TTATTGAAGG TCTGGTAGTA GAGACTGTAG AATTTGGTGC TTTTGTAAGC 
ATTGGAGCTA TGGATGGTCT TTTACACGTT AGCCAGATCA CTGATGATTT TATGTCCTAT 
GATGGTAAGA ATGGCAGGCT TATTAGCAAG GTCGGAAATC GTACTCTTTC AGAAGGTGAC 
AAAGTGCGTG CCCGTATCGT TGCTGTGAGC ACCAACGAGA GAGAGCCAAG GGATAGTAAG 
ATCGGATTGA CAATGCGCCA GCATGCTCTG GGCAGACTTG AATGGCTTGA AGATGCACGC 
AAGCCCAAGT CCGATGAATC TAAGAATAAA GATGAATAA 

 

Protein sequence

MYKRMKLKDT IRVAPRLLGE DVGVSVKDAL KEKLEGRVDK ALGSIVAITD IEEVGEGHIL 
VGDGAVYYDV IFEAIIFIPQ LQEVIEGLVV ETVEFGAFVS IGAMDGLLHV SQITDDFMSY 
DGKNGRLISK VGNRTLSEGD KVRARIVAVS TNEREPRDSK IGLTMRQHAL GRLEWLEDAR 
KPKSDESKNK DE