Gene Mbur_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_2193 
Symbol 
ID3998804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp2307716 
End bp2308453 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID637959922 
ProductDNA polymerase sliding clamp 
Protein accessionYP_566808 
Protein GI91774116 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00590] proliferating cell nuclear antigen (pcna) 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGG CGACAATTGA TGCATATCTT CTAAAGGATT CGATCGAAAC ACTTTCTGTG 
CTCGTGGACG AAGCAAGGTT CAGGATTTCA CCAGAAGGAG TTGTTGTAAG GGCGGTTGAC
CCTGCAAACG TTGCAATGGT AAGTTTTGAC CTTACCCCAG AGGCATTCGA TGACTTTGAA
GCAAATGACT GTGAATTAGG ATTGGACCTT TCAAGGATCA ATGATATACT GGGAGTTGCA
GACAGGGACG ATAAGGTCCA GATGGAACTC GATGAGGAAT CAAAGAAACT GAAGATCCAG
ATAGGCGGTT TTTCATATAC AATTTCACTG CTTGACCCAT CTACGATCCG TGCAGAACCT
AGAATTCCAC AGCTTGAACT GCCAGCAGAA ATAGTCCTTA ACGGAAAGGA CCTACAAAAA
GCTGTTAAAG CTGCTGAGAA AATAAGTGAC CATATGTTAC TTGGTGTTGA AGGAGAATCC
TTCTTCATGG AAGCAGAGGG TGACACCGAC CGTGTGAAGC TCACCATGAC ACGTGACCAG
CTTATTGACA TCAAGCCATC TCAAGTGCGT TCACTGTTCT CGCTTGACTA CCTGTCAGAC
ATTATAAAAC CTGCTTCAAA ATCCAACGAG ATCTCACTTC ACCTAGGCAA CGATTTTCCT
ATAAAGATCA ATTTCAGTAT TGCCAACGGA AAAGGCACCA TTGGATATCT GCTTGCACCA
AGAATTGAAT CAGACTAA
 
Protein sequence
MFKATIDAYL LKDSIETLSV LVDEARFRIS PEGVVVRAVD PANVAMVSFD LTPEAFDDFE 
ANDCELGLDL SRINDILGVA DRDDKVQMEL DEESKKLKIQ IGGFSYTISL LDPSTIRAEP
RIPQLELPAE IVLNGKDLQK AVKAAEKISD HMLLGVEGES FFMEAEGDTD RVKLTMTRDQ
LIDIKPSQVR SLFSLDYLSD IIKPASKSNE ISLHLGNDFP IKINFSIANG KGTIGYLLAP
RIESD