| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_2033 |
|---|
| Symbol | radA |
|---|
| ID | 3997415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 2138696 |
|---|
| End bp | 2139673 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637959771 |
|---|
| Product | DNA repair and recombination protein RadA |
|---|
| Protein accession | YP_566659 |
|---|
| Protein GI | 91773967 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | [TIGR02236] DNA repair and recombination protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.507845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAG TATTATTGGA AGATCTTGAT CACGTAGGAC CGGCAACAGC ACAGAAACTC
AAGGATGCCG GATTCACTAC CATTGAAGCC ATTGCTGTAG CCTCCCCGGC AGAACTTGCC
AACAGTGCGG AGATCGGGGA ATCCACAGCT GCAAAGATAA TCAACGCCGC CAGGCAGTCA
GCGGACATAG GCGGATTCGA GACAGGTGAC CTTGTTCTTG AAAGGCGGAA ACTTGTGGGC
AAACTGTCCA CCGGGTGCAC GGAATTCGAT GAGATGATGG GTGGCGGTAT AGAGACCCAG
TCCATCACGG AAATGTACGG TGAGTTCGGG TCTGGAAAGA CGCAGATCGC CCACCAGCTT
GCTGTGAACG TACAATTACC TCCCGAGCAG GGCGGTCTTG GTGGCTCTGT GATCATGATA
GATACCGAGA ACACCTTTAG GCCTGAAAGG ATCGCACAGA TGGTAAAAGG TATCTCTGAT
AAGCACGGCA TCGAGTACGA TCCTGAGGAG TTCCTCAAGA ACATCCATGT GGCACGTGCC
TTCAATTCCA ATCATCAGAT CCTTCTTGTG GACTCTGCCA ATGAGCTTGC CAATGAGCTC
AAAAATACTG AGATGCCGGT AAAACTTCTT ATCGTTGACT CCCTCACTGC CCATTTCAGG
GCCGAGTATA TCGGCAGGGG TACGCTTGCC GACAGGCAGC AGAAGCTCAA CAAGCATCTT
CATGAGATCC TGCGTTTTGG GGATCTTTCC AATGCATGTG TGGTTGTCAC CAATCAGGTC
ATGTCAAAAC CTGACGCTTT CTTCGGCGAC CCCACAAAAC CAATAGGCGG TCACATTCTC
GGCCACACTG CCACCTTCAG GCTCTACATA AGGAAATCCA AAGGAGAGAA AAGGATAGTC
AAGCTCGTGG ACTCTCCGAA CCTGCCGGAT GGTGAAGCCC TTATCTCAGT CACAACAGAT
GGTATTGGGG ATGCCTGA
|
|---|
| Protein sequence | MTEVLLEDLD HVGPATAQKL KDAGFTTIEA IAVASPAELA NSAEIGESTA AKIINAARQS
ADIGGFETGD LVLERRKLVG KLSTGCTEFD EMMGGGIETQ SITEMYGEFG SGKTQIAHQL
AVNVQLPPEQ GGLGGSVIMI DTENTFRPER IAQMVKGISD KHGIEYDPEE FLKNIHVARA
FNSNHQILLV DSANELANEL KNTEMPVKLL IVDSLTAHFR AEYIGRGTLA DRQQKLNKHL
HEILRFGDLS NACVVVTNQV MSKPDAFFGD PTKPIGGHIL GHTATFRLYI RKSKGEKRIV
KLVDSPNLPD GEALISVTTD GIGDA
|
|---|
| |