Gene Mbur_1952 details

Gene Information

• Locus tag: Mbur_1952
• ID: 3997853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 2049253
• End bp: 2051169
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637959694
• Product: Na+/solute symporter
• Protein accession: YP_566583
• Protein GI: 91773891
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG0591] Na+/proline symporter

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGGAT ATCAATTGTT TATGGCAATG CTTGCAGTTT ACATATGTGG ACTCATATGC 
ATTGGTTGGT ACTTTACAAA AAGACAGCAA ACAGTAACTG ATTTCTGGCT GGCAGGACGT 
AAGATCGGCA CAATAGGAAT AGGATTCTCC TCTGCCGCAT CATGGCTGAC CGCTGGTGGA 
ATATTAGCAG TTATTGGTTT CTTTATGCTA CTTGGAATGG GCTCCATTTG GGGGTTTGTA 
GCTCCTAACA TTCTGGCATT GCTTATAATC GCTATTTTTG TCAAGAAGTT CAAGAATCTA 
CCTTCTATCA CACAGGCTGA ACTTCTCGAA CAGAGGTACA GTTCTGCAAT ACGTGCTCCT 
GTAGGTATTA TTATCACTAT TGTCATGATC CTTTTTGCGG TAGCAGATAT CAAAGGATTC 
GCTCTTGTGT TGCAGATATT CTATGGCGTG GATCCGATCT ATGCGGCACT TATCGTTGCT 
CTCGCTGTTT CTGCGTATGT GACCCTCGGT GGTCTCAGTG CGGTAGTATG GACTGATGTC 
GTGCAGTTCG TTTTCCTTTC TATCTTTGCT CTTGCAATGG CATTTCTGGC GATCGGGGCA 
GCAACTTCAG GTTCCGCGGA TATTTCTTCT GCATCTGACC TGATATCAAA TGTATCCACA 
GATTGGTGGA ATCCGTTCAT CATAGGCATT CCGATGGTCC TTATCTTTGT TTTCGCTATC 
ATCCCCGGAT GGATAACAGA GCAGGATCCA TGGCAAAAAG TATGGGCGGC TAAAGACTCG 
ACATCTGCAA GGAATGGTCT TGTACTTGGC TCTTTCCTTG TAACAGTAGT ATTCACTGCA 
TGTGCGTTCA TTGCTATTGG ATTGAACTCA CTGTATCCTG AGATATCTGC GATGGGTTTC 
CCTATGGGAA TGGGGCTGGC AGAACCTGCA CTTCTTACAT TCATTGTAGA GACATTCTCT 
CCTGCTGTCA TCGGGCTCTG TGCGATTGGT CTTGCAGCAG CATCAATGTC CTGTGCGGAT 
ACTTTTGCAA CCTCGGGGGC ATCATGTGTT TCACGTGACA TCTACCAGAG GTTTGTCAAA 
CCGGACGCTA CAATGAAGCA GATGCTCACT ATCAACAGGC TGAGCGTTCT TTTTATTGTT 
GCAGCAGCAA CGGTTTCTTC GTTCTTCATA AACGGTATCC TCGATGCAAT TCACATTGCC 
ACTTTCATTG CAAGTGCATC CTATTTCTTC CCTCTCATGG GTGGACTTTA CTGGAAGCGC 
GCAACAAAAG AAGGTGCATT AGCAGGGCTT ATTCTCGGTG GTGTGGCACA GATATCATTT 
ACTGTGTATG ACCTTTTAAT GACCGCACCC ATGGCACCTC CATACCTTGA GACCGTTCAC 
CCAATTCTCA TGAACCACGG TGTAATTGTA GGAATGGGAT TGAGTGGAAT TGCTTTCTTT 
GGTGTATCCC TTCTGACAAA GCCATCGAAT GTCATCAATC TTGCTCCTTT CTTTAAGGAT 
GTGGCAGAAG AATTGGCCAG TCATGATGCA CAGGAGGTCG ATGATCAGTC TTTAGAATAT 
CAGAATTTCC TCAAGACACT CGATGAACAG ATCACCGGGG AACGTGCACA TCTTCACTTG 
AGGCTCGAAA GCTCAGCTAC AGTGAACTGG CGCAAGTTCA TAGAACAGCT AAGGGAGGCT 
TATCCTGTAT GGGTAACTCC GACTGGACTT GATTCAGTCT ACAGGCTCAT CCAGGCGGAC 
ATGCTTGCCT GTGTCTCTAT CACACGTGGT GAGAATGAAA AGGAGATTTG GTTCGCATCA 
GAACCACAAG TCGATTCTGT TGAAATGCAG AAGAAAGAGG TCTTTATTGC ATACAAAGAA 
GTATCAAAGG CTCTCGAAAA TGTCGGTATT CTCCTGACAA TTCCAAGCGA AGACTAA 

 

Protein sequence

MDGYQLFMAM LAVYICGLIC IGWYFTKRQQ TVTDFWLAGR KIGTIGIGFS SAASWLTAGG 
ILAVIGFFML LGMGSIWGFV APNILALLII AIFVKKFKNL PSITQAELLE QRYSSAIRAP 
VGIIITIVMI LFAVADIKGF ALVLQIFYGV DPIYAALIVA LAVSAYVTLG GLSAVVWTDV 
VQFVFLSIFA LAMAFLAIGA ATSGSADISS ASDLISNVST DWWNPFIIGI PMVLIFVFAI 
IPGWITEQDP WQKVWAAKDS TSARNGLVLG SFLVTVVFTA CAFIAIGLNS LYPEISAMGF 
PMGMGLAEPA LLTFIVETFS PAVIGLCAIG LAAASMSCAD TFATSGASCV SRDIYQRFVK 
PDATMKQMLT INRLSVLFIV AAATVSSFFI NGILDAIHIA TFIASASYFF PLMGGLYWKR 
ATKEGALAGL ILGGVAQISF TVYDLLMTAP MAPPYLETVH PILMNHGVIV GMGLSGIAFF 
GVSLLTKPSN VINLAPFFKD VAEELASHDA QEVDDQSLEY QNFLKTLDEQ ITGERAHLHL 
RLESSATVNW RKFIEQLREA YPVWVTPTGL DSVYRLIQAD MLACVSITRG ENEKEIWFAS 
EPQVDSVEMQ KKEVFIAYKE VSKALENVGI LLTIPSED